STROBE Publications

Showing publications 401 – 450 of 452

2018

401

Cryo-EM structure of the human α5β3 GABAA receptor

S. Liu, L. Xu, F. Guan, Y. Liu, Y. Cui, Q. Zhang, X. Zheng, G. Bi, Z. Hong Zhou, X. Zhang, S. Ye, Cell Research, 28, 958-961, (2018).

10.1038/s41422-018-0077-8

402

Building atomic models based on near atomic resolution cryoEM maps with existing tools

I. Yu, L. Nguyen, J. Avaylon, K. Wang, M. Lai, Z. Hong Zhou, Journal of Structural Biology, 204, 313-318, (2018).

10.1016/j.jsb.2018.08.004

403

Nanoimaging and Control of Molecular Vibrations through Electromagnetically Induced Scattering Reaching the Strong Coupling Regime

E. A. Muller, B. Pollard, H. A. Bechtel, R. Adato, D. Etezadi, H. Altug, M. B. Raschke, ACS Photonics, 5, 3594-3600, (2018).

10.1021/acsphotonics.8b00425

404

In Situ Structures of the Polymerase Complex and RNA Genome Show How Aquareovirus Transcription Machineries Respond to Uncoating

K. Ding, L. Nguyen, Z. Hong Zhou, Journal of Virology, 92, e00774-18, (2018).

10.1128/jvi.00774-18

405

Aberration recovery by imaging a weak diffuser

G. Gunjala, S. Sherwin, A. Shanker, L. Waller, Optics Express, 26, 21054, (2018).

10.1364/oe.26.021054

406

Block Matching Local SVD Operator Based Sparsity and TV Regularization for Image Denoising

J. Liu, S. Osher, Journal of Scientific Computing, 78, 607-624, (2018).

10.1007/s10915-018-0785-8

407

Quantitative characterization of high temperature oxidation using electron tomography and energy-dispersive X-ray spectroscopy

J. Zhou, M. Taylor, G. A. Melinte, A. J. Shahani, C. C. Dharmawardhana, H. Heinz, P. W. Voorhees, J. H. Perepezko, K. Bustillo, P. Ercius, J. Miao, Scientific Reports, 8, 10239, (2018).

10.1038/s41598-018-28348-3

408

Tunable Polaron Distortions Control the Extent of Halide Demixing in Lead Halide Perovskites

C. G. Bischak, A. B. Wong, E. Lin, D. T. Limmer, P. Yang, N. S. Ginsberg, The Journal of Physical Chemistry Letters, 9, 3998-4005, (2018).

10.1021/acs.jpclett.8b01512

409

Super-Resolution Imaging of Clickable Graphene Nanoribbons Decorated with Fluorescent Dyes

D. Joshi, M. Hauser, G. Veber, A. Berl, K. Xu, F. R. Fischer, Journal of the American Chemical Society, 140, 9574-9580, (2018).

10.1021/jacs.8b04679

410

Compressed sensing FTIR nano-spectroscopy and nano-imaging

B. Kästner, F. Schmähling, A. Hornemann, G. Ulrich, A. Hoehl, M. Kruskopf, K. Pierz, M. B. Raschke, G. Wübbeler, C. Elster, Optics Express, 26, 18115, (2018).

10.1364/oe.26.018115

411

Accumulation of Dense Core Vesicles in Hippocampal Synapses Following Chronic Inactivity

C. Tao, Y. Liu, Z. Hong Zhou, P. Lau, G. Bi, Frontiers in Neuroanatomy, 12, (2018).

10.3389/fnana.2018.00048

412

Adaptive wavefront shaping for controlling nonlinear multimode interactions in optical fibres

O. Tzang, A. M. Caravaca-Aguirre, K. Wagner, R. Piestun, Nature Photonics, 12, 368–374, (2018).

10.1038/s41566-018-0167-7

413

Understanding Chemical Bonding in Alloys and the Representation in Atomistic Simulations

J. Liu, E. Tennessen, J. Miao, Y. Huang, J. M. Rondinelli, H. Heinz, The Journal of Physical Chemistry C, 122, 14996-15009, (2018).

10.1021/acs.jpcc.8b01891

414

Single-shot 3D coherent diffractive imaging of core-shell nanoparticles with elemental specificity

A. Pryor, A. Rana, R. Xu, J. A. Rodriguez, Y. Yang, M. Gallagher-Jones, H. Jiang, K. Kanhaiya, M. Nathanson, J. Park, S. Kim, S. Kim, D. Nam, Y. Yue, J. Fan, Z. Sun, B. Zhang, D. F. Gardner, C. Dias, Y. Joti, T. Hatsui, T. Kameshima, Y. Inubushi, K. Tono, J. Lee, M. Yabashi, C. Song, T. Ishikawa, H. C. Kapteyn, M. M. Murnane, H. Heinz, J. Miao, Scientific Reports, 8, 8284, (2018).

10.1038/s41598-018-26182-1

415

Structure of Telomerase with Telomeric DNA

J. Jiang, Y. Wang, L. Sušac, H. Chan, R. Basu, Z. Hong Zhou, J. Feigon, Cell, 173, 1179-1190.e13, (2018).

10.1016/j.cell.2018.04.038

416

Far Infrared Synchrotron Near-Field Nanoimaging and Nanospectroscopy

O. Khatib, H. A. Bechtel, M. C. Martin, M. B. Raschke, G. ce Carr, ACS Photonics, 5, 2773-2779, (2018).

10.1021/acsphotonics.8b00565

417

In situ coherent diffractive imaging

Y. Lo, L. Zhao, M. Gallagher-Jones, A. Rana, J. J. Lodico, W. Xiao, B. C. Regan, J. Miao, Nature Communications, 9, (2018).

10.1038/s41467-018-04259-9

418

Analysis of Global and Site-Specific Radiation Damage in Cryo-EM

J. Hattne, D. Shi, C. Glynn, C. Zee, M. Gallagher-Jones, M. W. Martynowycz, J. A. Rodriguez, T. Gonen, Structure, 26, 759-766.e4, (2018).

10.1016/j.str.2018.03.021

419

Students’ flexible use of ontologies and the value of tentative reasoning: Examples of conceptual understanding in three canonical topics of quantum mechanics

J. R. Hoehn, N. D. Finkelstein, Physical Review Physics Education Research, 14, 010122, (2018).

10.1103/physrevphyseducres.14.010122

420

Structure of the herpes simplex virus 1 capsid with associated tegument protein complexes

X. Dai, Z. Hong Zhou, Science, 360, eaao7298, (2018).

10.1126/science.aao7298

421

Atomic Structure of the E2 Inner Core of Human Pyruvate Dehydrogenase Complex

J. Jiang, F. L. Baiesc, Y. Hiromasa, X. Yu, W. Hui, X. Dai, T. E. Roche, Z. Hong Zhou, Biochemistry, 57, 2325-2334, (2018).

10.1021/acs.biochem.8b00357

422

Spectrally Resolved and Functional Super-resolution Microscopy via Ultrahigh-Throughput Single-Molecule Spectroscopy

R. Yan, S. Moon, S. J. Kenny, K. Xu, Accounts of Chemical Research, 51, 697-705, (2018).

10.1021/acs.accounts.7b00545

423

Long-Lived Correlated Triplet Pairs in a π-Stacked Crystalline Pentacene Derivative

B. D. Folie, J. B. Haber, S. Refaely-Abramson, J. B. Neaton, N. S. Ginsberg, Journal of the American Chemical Society, 140, 2326-2335, (2018).

10.1021/jacs.7b12662

424

Intercalation events visualized in single microcrystals of graphite

E. R. White, J. J. Lodico, B. C. Regan, Nature Communications, 1969, (2017).

10.1038/s41467-017-01787-8

425

Sub-ångström cryo-EM structure of a prion protofibril reveals a polar clasp

M. Gallagher-Jones, C. Glynn, D. R. Boyer, M. W. Martynowycz, E. Hernandez, J. Miao, C. Zee, I. V. Novikova, L. Goldschmidt, H. T. McFarlane, G. F. Helguera, J. E. Evans, M. R. Sawaya, D. Cascio, D. S. Eisenberg, T. Gonen, J. A. Rodriguez, Nature Structural & Molecular Biology, 25, 131-134, (2018).

10.1038/s41594-017-0018-0

426

Membrane insertion of—and membrane potential sensing by—semiconductor voltage nanosensors: Feasibility demonstration

K. Park, Y. Kuo, V. Shvadchak, A. Ingargiola, X. Dai, L. Hsiung, W. Kim, H. Zhou, P. Zou, A. J. Levine, J. Li, S. Weiss, Science Advances, 4, e1601453, (2018).

10.1126/sciadv.1601453

427

Nanoimaging of Electronic Heterogeneity in Bi2Se3 and Sb2Te3 Nanocrystals

X. Lu, O. Khatib, X. Du, J. Duan, W. Wei, X. Liu, H. A. Bechtel, F. D'Apuzzo, M. Yan, A. Buyanin, Q. Fu, J. Chen, M. Salmeron, J. Zeng, M. B. Raschke, P. Jiang, X. Bao, Advanced Electronic Materials, 4, 1700377, (2017).

10.1002/aelm.201700377

428

Thermometry of Silicon Nanoparticles

M. Mecklenburg, B. Zutter, B. C. Regan, Physical Review Applied, 9, 014005, (2018).

10.1103/physrevapplied.9.014005

429

Structure and mutagenesis reveal essential capsid protein interactions for KSHV replication

X. Dai, D. Gong, H. Lim, J. Jih, T. Wu, R. Sun, Z. Hong Zhou, Nature, 553, 521-525, (2018).

10.1038/nature25438

430

Multiple beam ptychography for large field-of-view, high throughput, quantitative phase contrast imaging

C. Bevis, R. Karl, J. Reichanadter, D. F. Gardner, C. Porter, E. Shanblatt, M. Tanksalvala, G. F. Mancini, H. Kapteyn, M. Murnane, D. Adams, Ultramicroscopy, 184, 164-171, (2018).

10.1016/j.ultramic.2017.08.018

2017

431

Structure of the yeast spliceosomal postcatalytic P complex

S. Liu, X. Li, L. Zhang, J. Jiang, R. C. Hill, Y. Cui, K. C. Hansen, Z. Hong Zhou, R. Zhao, Science, 358, 1278-1283, (2017).

10.1126/science.aar3462

432

Catastrophic disassembly of actin filaments via Mical-mediated oxidation

E. E. Grintsevich, P. Ge, M. R. Sawaya, H. Yesilyurt, J. R. Terman, Z. Hong Zhou, E. Reisler, Nature Communications, 8, (2017).

10.1038/s41467-017-02357-8

433

General-purpose, wide field-of-view reflection imaging with a tabletop 13  nm light source

C. L. Porter, M. Tanksalvala, M. Gerrity, G. Miley, X. Zhang, C. Bevis, E. Shanblatt, R. Karl, M. M. Murnane, D. E. Adams, H. C. Kapteyn, Optica, 4, 1552-1557, (2017).

10.1364/optica.4.001552

434

3D image scanning microscopy with engineered excitation and detection

C. Roider, R. Piestun, A. Jesacher, Optica, 4, 1373, (2017).

10.1364/optica.4.001373

435

A streaming multi-GPU implementation of image simulation algorithms for scanning transmission electron microscopy

A. Pryor, C. Ophus, J. Miao, Advanced Structural and Chemical Imaging, 3, 15, (2017).

10.1186/s40679-017-0048-z

436

Low Dimensional Manifold Model for Image Processing

S. Osher, Z. Shi, W. Zhu, SIAM Journal on Imaging Sciences, 10, 1669-1690, (2017).

10.1137/16m1058686

437

Conformation-Directed Formation of Self-Healing Diblock Copolypeptide Hydrogels via Polyion Complexation

Y. Sun, A. L. Wollenberg, T. O’Shea, Y. Cui, Z. Hong Zhou, M. V. Sofroniew, T. J. Deming, Journal of the American Chemical Society, 139, 15114-15121, (2017).

10.1021/jacs.7b08190

438

Noninvasive Cathodoluminescence-Activated Nanoimaging of Dynamic Processes in Liquids

C. G. Bischak, R. B. Wai, C. Cherqui, J. A. Busche, S. C. Quillin, C. L. Hetherington, Z. Wang, C. D. Aiello, D. G. Schlom, S. Aloni, D. nk Ogletree, D. J. Masiello, N. S. Ginsberg, ACS Nano, 11, 10583-10590, (2017).

10.1021/acsnano.7b06081

439

Resolving ultrafast exciton migration in organic solids at the nanoscale

S. B. Penwell, L. S. Ginsberg, R. Noriega, N. S. Ginsberg, Nature Materials, 16, 1136-1141, (2017).

10.1038/nmat4975

440

Atomic structure of the human cytomegalovirus capsid with its securing tegument layer of pp150

X. Yu, J. Jih, J. Jiang, Z. Hong Zhou, Science, 356, eaam6892, (2017).

10.1126/science.aam6892

441

Reliable computational design of biological-inorganic materials to the large nanometer scale using Interface-FF

C. C. Dharmawardhana, K. Kanhaiya, T. Lin, A. Garley, M. R. Knecht, J. Zhou, J. Miao, H. Heinz, Molecular Simulation, 43, 1394-1405, (2017).

10.1080/08927022.2017.1332414

442

Correlative cellular ptychography with functionalized nanoparticles at the Fe L-edge

M. Gallagher-Jones, C. Dias, A. Pryor, K. Bouchmella, L. Zhao, Y. Lo, M. Cardoso, D. Shapiro, J. Rodriguez, J. Miao, Scientific Reports, 4757, (2017).

10.1038/s41598-017-04784-5

443

Enhanced information content for three-dimensional localization and tracking using the double-helix point spread function with variable-angle illumination epifluorescence microscopy

D. Wang, A. Agrawal, R. Piestun, D. K. Schwartz, Applied Physics Letters, 110, 211107, (2017).

10.1063/1.4984133

444

GENFIRE: A generalized Fourier iterative reconstruction algorithm for high-resolution 3D imaging

A. Pryor, Y. Yang, A. Rana, M. Gallagher-Jones, J. Zhou, Y. Lo, G. Melinte, W. Chiu, J. A. Rodriguez, J. Miao, Scientific Reports, 7, 10409 , (2017).

10.1038/s41598-017-09847-1

445

Sub-wavelength coherent imaging of periodic samples using a 13.5 nm tabletop high harmonic light source

D. F. Gardner, M. Tanksalvala, E. R. Shanblatt, X. Zhang, B. R. Galloway, C. L. Porter, R. Karl Jr, C. Bevis, D. E. Adams, H. C. Kapteyn, M. M. Murnane, G. F. Mancini, Nature Photonics, 11, 259-263, (2017).

10.1038/nphoton.2017.33

446

Deciphering chemical order/disorder and material properties at the single-atom level

Y. Yang, C. Chen, M. C. Scott, C. Ophus, R. Xu, A. Pryor, L. Wu, F. Sun, W. Theis, J. Zhou, M. Eisenbach, P. C. Kent, R. F. Sabirianov, H. Zeng, P. Ercius, J. Miao, Nature, 542, 75-79, (2017).

10.1038/nature21042

447

Double-shot MeV electron diffraction and microscopy

P. P. Musumeci, D. D. Cesar, J. J. Maxson, Structural Dynamics, 4, 044025, (2017).

10.1063/1.4983390

2016

448

Corrigendum: CryoEM structure of the Methanospirillum hungatei archaellum reveals structural features distinct from the bacterial flagellum and type IV pilus

N. Poweleit, P. Ge, H. H. Nguyen, R. R. Ogorzalek Loo, R. P. Gunsalus, Z. Hong Zhou, Nature Microbiology, 2, 16264, (2016).

10.1038/nmicrobiol.2016.264

449

In situ structures of the genome and genome-delivery apparatus in a single-stranded RNA virus

X. Dai, Z. Li, M. Lai, S. Shu, Y. Du, Z. Hong Zhou, R. Sun, Nature, 541, 112-116, (2016).

10.1038/nature20589

450

Frontier methods in coherent X-ray diffraction for high-resolution structure determination

M. Gallagher-Jones, J. A. Rodriguez, J. Miao, Quarterly Reviews of Biophysics, 49, (2016).

10.1017/s0033583516000147