Publications

1

Ptychographic atomic electron tomography: Towards three-dimensional imaging of individual light atoms in materials, Dillan J. Chang, Dennis S. Kim, Arjun Rana, Xuezeng Tian, Jihan Zhou, Peter Ercius, and Jianwei Miao

, Physical Review B, 102, 174101, (2020).

10.1103/PhysRevB.102.174101

2

Depth-resolved Mueller matrix polarimetry microscopy of the rat cornea

V. N. Du Le, I. Saytashev, S. Saha, P. F. Lopez, M. Laughrey, J. C. Ramella-Roman, Biomedical Optics Express, 5982, (2020).

10.1364/boe.402201

3

Spectral DiffuserCam: lensless snapshot hyperspectral imaging with a spectral filter array

K. Monakhova, K. Yanny, N. Aggarwal, L. Waller, Optica, 7, 1298-1307, (2020).

10.1364/optica.397214

4

An ultra-compact x-ray free-electron laser

J. Rosenzweig, N. Majernik, R. Robles, G. Andonian, O. Camacho, A. Fukasawa, A. Kogar, G. Lawler, J. Miao, P. Musumeci, B. Naranjo, Y. Sakai, R. Candler, B. Pound, C. Pellegrini, C. Emma, A. Halavanau, J. Hastings, Z. Li, M. Nasr, S. Tantawi, P. P. Anisimov, B. Carlsten, F. Krawczyk, E. Simakov, L. Faillace, M. Ferrario, B. Spataro, S. Karkare, J. Maxson, Y. Ma, J. Wurtele, A. Murokh, A. Zholents, A. Cianchi, D. Cocco, S. van der Geer, New Journal of Physics, 093067, (2020).

10.1088/1367-2630/abb16c

5

Charging-driven coarsening and melting of a colloidal nanoparticle monolayer at an ionic liquid-vacuum interface

C. G. Bischak, J. G. Raybin, J. W. Kruppe, N. S. Ginsberg, Soft Matter, 9578-9589, (2020).

10.1039/d0sm01395a

6

Tilted fluctuation electron microscopy

E. Kennedy, N. Reynolds, L. Rangel DaCosta, F. Hellman, C. Ophus, M. C. Scott, Applied Physics Letters, 117, 091903, (2020).

10.1063/5.0015532

7

Process of transforming of an introductory mechanics lab course at Fort Lewis College

A. Werth, H. J. Lewandowski, 2020 Physics Education Research Conference Proceedings, (2020).

10.1119/perc.2020.pr.werth

8

Potential of Attosecond Coherent Diffractive Imaging

A. Rana, J. Zhang, M. Pham, A. Yuan, Y. Lo, H. Jiang, S. J. Osher, J. Miao, Physical Review Letters, 125, 086101, (2020).

10.1103/physrevlett.125.086101

9

Structural basis for STAT2 suppression by flavivirus NS5

B. Wang, S. Thurmond, K. Zhou, M. T. Sánchez-Aparicio, J. Fang, J. Lu, L. Gao, W. Ren, Y. Cui, E. C. Veit, H. Hong, M. J. Evans, S. E. O’Leary, A. García-Sastre, Z. ng Zhou, R. Hai, J. Song, Nature Structural & Molecular Biology, (2020).

10.1038/s41594-020-0472-y

10

Attosecond light science and its application for probing quantum materials

X. Shi, C. Liao, Z. Tao, E. Cating-Subramanian, M. Murnane, C. Hernández-García, H. Kapteyn, Journal of Physics B: Atomic, Molecular and Optical Physics, 53, 184008, (2020).

10.1088/1361-6455/aba2fb

11

Liquid-like Interfaces Mediate Structural Phase Transitions in Lead Halide Perovskites

C. G. Bischak, M. Lai, Z. Fan, D. Lu, P. David, D. Dong, H. Chen, A. S. Etman, T. Lei, J. Sun, M. Grünwald, D. T. Limmer, P. Yang, N. S. Ginsberg, Matter, 3, 534-545, (2020).

10.1016/j.matt.2020.07.015

12

Electron-Transparent Thermoelectric Coolers Demonstrated with Nanoparticle and Condensation Thermometry

W. A. Hubbard, M. Mecklenburg, J. J. Lodico, Y. Chen, X. Ling, R. Patil, W. ew Kessel, G. K. Flatt, H. Chan, B. Vareskic, G. Bal, B. Zutter, B. C. Regan, ACS Nano, 11510-11517, (2020).

10.1021/acsnano.0c03958

13

Fragment-based determination of a proteinase K structure from MicroED data using ARCIMBOLDO_SHREDDER

L. S. Richards, C. Millán, J. Miao, M. W. Martynowycz, M. R. Sawaya, T. Gonen, R. J. Borges, I. Usón, J. A. Rodriguez, Acta Crystallographica Section D Structural Biology, 76, 703-712, (2020).

10.1107/s2059798320008049

14

Structures of capsid and capsid-associated tegument complex inside the Epstein–Barr virus

W. Liu, Y. Cui, C. Wang, Z. Li, D. Gong, X. Dai, G. Bi, R. Sun, Z. ng Zhou, Nature Microbiology, (2020).

10.1038/s41564-020-0758-1

15

Disorder recovers the Wiedemann-Franz law in the metallic phase of VO2

L. Jin, S. E. Zeltmann, H. Choe, H. Liu, F. I. Allen, A. M. Minor, J. Wu, Physical Review B, 102, 041120(R), (2020).

10.1103/physrevb.102.041120

16

Extreme ultraviolet microscope characterization using photomask surface roughness

G. Gunjala, A. Wojdyla, S. Sherwin, A. Shanker, M. P. Benk, K. A. Goldberg, P. P. Naulleau, L. Waller, Scientific Reports, 10, 11673, (2020).

10.1038/s41598-020-68588-w

17

Full characterization of ultrathin 5-nm low- k dielectric bilayers: Influence of dopants and surfaces on the mechanical properties

T. D. Frazer, J. L. Knobloch, J. N. Hernández-Charpak, K. M. Hoogeboom-Pot, D. Nardi, S. Yazdi, W. Chao, E. H. Anderson, M. K. Tripp, S. W. King, H. C. Kapteyn, M. M. Murnane, B. Abad, Physical Review Materials, 4, 073603, (2020).

10.1103/physrevmaterials.4.073603

18

Interpretable molecular models for molybdenum disulfide and insight into selective peptide recognition

J. Liu, J. Zeng, C. Zhu, J. Miao, Y. Huang, H. Heinz, Chemical Science, (2020).

10.1039/d0sc01443e

19

Structural basis for capsid recruitment and coat formation during HSV-1 nuclear egress

E. Draganova, J. Zhang, Z. Zhou, E. Heldwein, eLife, 9, e56627, (2020).

10.7554/elife.56627

20

Photoinduced phase separation in the lead halides is a polaronic effect

D. T. Limmer, N. S. Ginsberg, The Journal of Chemical Physics, 152, 230901, (2020).

10.1063/1.5144291

21

Direct Correlation of Single-Particle Motion to Amorphous Microstructural Components of Semicrystalline Poly(ethylene oxide) Electrolytic Films

T. D. Roberts, R. Yuan, L. Xiang, M. Delor, R. Pokhrel, K. Yang, E. Aqad, T. Marangoni, P. Trefonas, K. Xu, N. S. Ginsberg, The Journal of Physical Chemistry Letters, 11, 4849-4858, (2020).

10.1021/acs.jpclett.0c01318

22

Deep phase decoder: self-calibrating phase microscopy with an untrained deep neural network

E. Bostan, R. Heckel, M. Chen, M. Kellman, L. Waller, Optica, 7, 559, (2020).

10.1364/optica.389314

23

In Liquid Infrared Scattering Scanning Near-Field Optical Microscopy for Chemical and Biological Nanoimaging

B. T. O’Callahan, K. Park, I. V. Novikova, T. Jian, C. Chen, E. A. Muller, P. Z. El-Khoury, M. B. Raschke, A. tt Lea, Nano Letters, 20, 4497-4504, (2020).

10.1021/acs.nanolett.0c01291

24

Dynamic single-cell intracellular pH sensing using a SERS-active nanopipette

J. Guo, A. Sesena Rubfiaro, Y. Lai, J. Moscoso, F. Chen, Y. Liu, X. Wang, J. He, The Analyst, 145, 4852-4859, (2020).

10.1039/d0an00838a

25

Atomic structures determined from digitally defined nanocrystalline regions

M. Gallagher-Jones, K. C. Bustillo, C. Ophus, L. S. Richards, J. Ciston, S. Lee, A. M. Minor, J. A. Rodriguez, IUCrJ, 7, (2020).

10.1107/s2052252520004030

26

Genome organization and interaction with capsid protein in a multipartite RNA virus

C. Beren, Y. Cui, A. Chakravarty, X. Yang, A. N. Rao, C. M. Knobler, Z. ng Zhou, W. M. Gelbart, Proceedings of the National Academy of Sciences, 117, 10673-10680, (2020).

10.1073/pnas.1915078117

27

Multi-layer Born multiple-scattering model for 3D phase microscopy

M. Chen, D. Ren, H. Liu, S. Chowdhury, L. Waller, Optica, 7, 394, (2020).

10.1364/optica.383030

28

Spatially Resolved Exciton and Charge Transport in Emerging Semiconductors

N. S. Ginsberg, W. A. Tisdale, Annual Review of Physical Chemistry, 71, (2020).

10.1146/annurev-physchem-052516-050703

29

Self validating Mueller matrix Micro–Mesoscope (SAMMM) for the characterization of biological media

I. Saytashev, S. Saha, J. Chue-Sang, P. Lopez, M. Laughrey, J. C. Ramella-Roman, Optics Letters, 45, 2168, (2020).

10.1364/ol.387747

30

Action of a minimal contractile bactericidal nanomachine

P. Ge, D. Scholl, N. S. Prokhorov, J. Avaylon, M. M. Shneider, C. Browning, S. A. Buth, M. Plattner, U. Chakraborty, K. Ding, P. G. Leiman, J. F. Miller, Z. ng Zhou, Nature, 580, 658-662, (2020).

10.1038/s41586-020-2186-z

31

Cryo-EM structure of a human prion fibril with a hydrophobic, protease-resistant core

C. Glynn, M. R. Sawaya, P. Ge, M. Gallagher-Jones, C. W. Short, R. Bowman, M. Apostol, Z. ng Zhou, D. S. Eisenberg, J. A. Rodriguez, Nature Structural & Molecular Biology, 27, 417-423, (2020).

10.1038/s41594-020-0403-y

32

Development of Lipid-Coated Semiconductor Nanosensors for Recording of Membrane Potential in Neurons

A. Ludwig, P. Serna, L. Morgenstein, G. Yang, O. Bar-Elli, G. Ortiz, E. Miller, D. Oron, A. Grupi, S. Weiss, A. Triller, ACS Photonics, 7, 1141-1152, (2020).

10.1021/acsphotonics.9b01558

33

Atomic electron tomography in three and four dimensions

J. Zhou, Y. Yang, P. Ercius, J. Miao, MRS Bulletin, 45, 290-297, (2020).

10.1557/mrs.2020.88

34

Heterogeneous Cation–Lattice Interaction and Dynamics in Triple-Cation Perovskites Revealed by Infrared Vibrational Nanoscopy

J. Nishida, A. H. Alfaifi, T. P. Gray, S. E. Shaheen, M. B. Raschke, ACS Energy Letters, 5, 1636-1643, (2020).

10.1021/acsenergylett.0c00522

35

Reactive modeling of Mo3Si oxidation and resulting silica morphology

C. C. Dharmawardhana, J. Zhou, M. Taylor, J. Miao, J. H. Perepezko, H. Heinz, Acta Materialia, 187, 93-102, (2020).

10.1016/j.actamat.2020.01.048

36

Development of Multifunctional Biopolymeric Auto-Fluorescent Micro- and Nanogels as a Platform for Biomedical Applications

A. Vashist, V. Atluri, A. Raymond, A. Kaushik, T. Parira, Z. Huang, A. Durygin, A. Tomitaka, R. Nikkhah-Moshaie, A. Vashist, M. Agudelo, H. S. Chand, I. Saytashev, J. C. Ramella-Roman, M. Nair, Frontiers in Bioengineering and Biotechnology, 8, (2020).

10.3389/fbioe.2020.00315

37

Carrier Diffusion Lengths Exceeding 1 μm Despite Trap-Limited Transport in Halide Double Perovskites

M. Delor, A. H. Slavney, N. R. Wolf, M. R. Filip, J. B. Neaton, H. I. Karunadasa, N. S. Ginsberg, ACS Energy Letters, 5, 1337-1345, (2020).

10.1021/acsenergylett.0c00414

38

Sub-acoustic resolution optical focusing through scattering using photoacoustic fluctuation guided wavefront shaping

M. A. Inzunza-Ibarra, E. Premillieu, C. Grünsteidl, R. Piestun, T. W. Murray, Optics Express, 28, 9823-9832, (2020).

10.1364/oe.385320

39

Nondestructive measurements of the mechanical and structural properties of nanostructured metalattices

B. Abad, J. L. Knobloch, T. D. Frazer, J. N. Hernández-Charpak, H. Y. Cheng, A. J. Grede, N. C. Giebink, T. E. Mallouk, P. Mahale, N. N. Nova, A. A. Tomaschke, V. L. Ferguson, V. H. Crespi, V. Gopalan, H. C. Kapteyn, J. V. Badding, M. M. Murnane, Nano Letters, (2020).

10.1021/acs.nanolett.0c00167

40

Vibrational exciton nanoimaging of phases and domains in porphyrin nanocrystals

E. A. Muller, T. P. Gray, Z. Zhou, X. Cheng, O. Khatib, H. A. Bechtel, M. B. Raschke, Proceedings of the National Academy of Sciences, 117, 7030-7037, (2020).

10.1073/pnas.1914172117

41

Ultrashort electron probe opportunities

P. Musumeci, Nature Photonics, 14, 199-200, (2020).

10.1038/s41566-020-0613-1

42

Resolving Enhanced Mn2+ Luminescence near the Surface of CsPbCl3 with Time-Resolved Cathodoluminescence Imaging

R. B. Wai, N. Ramesh, C. D. Aiello, J. G. Raybin, S. E. Zeltmann, C. G. Bischak, E. Barnard, S. Aloni, D. nk Ogletree, A. M. Minor, N. S. Ginsberg, The Journal of Physical Chemistry Letters, 11, 2624-2629, (2020).

10.1021/acs.jpclett.0c00574

43

Computationally aided, entropy-driven synthesis of highly efficient and durable multi-elemental alloy catalysts

Y. Yao, Z. Liu, P. Xie, Z. Huang, T. Li, D. Morris, Z. Finfrock, J. Zhou, M. Jiao, J. Gao, Y. Mao, J. Miao, P. Zhang, R. Shahbazian-Yassar, C. Wang, G. Wang, L. Hu, Science Advances, 6, eaaz0510, (2020).

10.1126/sciadv.aaz0510

44

On-chip fluorescence microscopy with a random microlens diffuser

G. Kuo, F. Linda Liu, I. Grossrubatscher, R. Ng, L. Waller, Optics Express, 28, 8384-8399, (2020).

10.1364/oe.382055

45

Correlating the three-dimensional atomic defects and electronic properties of two-dimensional transition metal dichalcogenides

X. Tian, D. S. Kim, S. Yang, C. J. Ciccarino, Y. Gong, Y. Yang, Y. Yang, B. Duschatko, Y. Yuan, P. M. Ajayan, J. Idrobo, P. Narang, J. Miao, Nature Materials, (2020).

10.1038/s41563-020-0636-5

46

A comprehensive experimental system for measuring molecular two-photon absorption using an ultrafast entangled photon pair excitation source

A. Mikhaylov, K. M. Parzuchowski, M. D. Mazurek, D. J. Lum, T. Gerrits, C. H. Champ, M. J. Stevens, R. Jimenez, Advanced Optical Techniques for Quantum Information, Sensing, and Metrology, (2020).

10.1117/12.2541888

47

Mapping photocathode quantum efficiency with ghost imaging

K. K. Kabra, S. S. Li, F. F. Cropp, T. J. Lane, P. P. Musumeci, D. D. Ratner, Physical Review Accelerators and Beams, 23, 022803, (2020).

10.1103/physrevaccelbeams.23.022803

48

Atomic structures of anthrax toxin protective antigen channels bound to partially unfolded lethal and edema factors

N. J. Hardenbrook, S. Liu, K. Zhou, K. Ghosal, Z. Z. Hong Zhou, B. A. Krantz, Nature Communications, 11, 840, (2020).

10.1038/s41467-020-14658-6

49

Cutting antiparallel DNA strands in a single active site

X. Chen, Y. Cui, R. B. Best, H. Wang, Z. ng Zhou, W. Yang, M. Gellert, Nature Structural & Molecular Biology, 27, 119-126, (2020).

10.1038/s41594-019-0363-2

50

How mouse RAG recombinase avoids DNA transposition

X. Chen, Y. Cui, H. Wang, Z. ng Zhou, M. Gellert, W. Yang, Nature Structural & Molecular Biology, 27, 127-133, (2020).

10.1038/s41594-019-0366-z

STROBE Publications

2020