Publications

51

Deep-Learning Electron Diffractive Imaging

D. J. Chang, C. M. O’Leary, C. Su, D. A. Jacobs, S. Kahn, A. Zettl, J. Ciston, P. Ercius, J. Miao, Physical Review Letters, 130, 016101, (2023).

10.1103/physrevlett.130.016101

52

Exceeding the limits of algorithmic self-calibrated aberration recovery in Fourier ptychography

E. Li, S. Sherwin, G. Gunjala, L. Waller, Optics Continuum, 2, 119, (2023).

10.1364/optcon.475990

53

Discovery, structure, and function of filamentous 3-methylcrotonyl-CoA carboxylase

J. J. Hu, J. J. Lee, Y. Liu, C. Yu, L. Huang, I. Aphasizheva, R. Aphasizhev, Z. Hong Zhou, Structure, 31, 100-110.e4, (2023).

10.1016/j.str.2022.11.015

54

CryoEM structures of anion exchanger 1 capture multiple states of inward- and outward-facing conformations

H. R. Zhekova, J. Jiang, W. Wang, K. Tsirulnikov, G. Kayık, H. Khan, R. Azimov, N. Abuladze, L. Kao, D. Newman, S. u. Noskov, D. er Tieleman, Z. Hong Zhou, A. Pushkin, I. Kurtz, Communications Biology, 5, (2022).

10.1038/s42003-022-04306-8

55

Disentangling multiple scattering with deep learning: application to strain mapping from electron diffraction patterns

J. Munshi, A. Rakowski, B. H. Savitzky, S. E. Zeltmann, J. Ciston, M. Henderson, S. Cholia, A. M. Minor, M. Y. Chan, C. Ophus, npj Computational Materials, 8, (2022).

10.1038/s41524-022-00939-9

56

Visible-Light Azidation and Chemical Patterning of Graphene via Photoredox Catalysis

W. Li, Y. Li, B. Wang, K. Xu, The Journal of Physical Chemistry C, 126, 21281-21286, (2022).

10.1021/acs.jpcc.2c07399

57

Ultrafast electron diffraction: Visualizing dynamic states of matter

D. D. Filippetto, P. P. Musumeci, R. K. Li, B. J. Siwick, M. R. Otto, M. M. Centurion, J. F. Nunes, Reviews of Modern Physics, 94, 045004, (2022).

10.1103/revmodphys.94.045004

58

Accurate quantification of lattice temperature dynamics from ultrafast electron diffraction of single-crystal films using dynamical scattering simulations

D. B. Durham, C. Ophus, K. M. Siddiqui, A. M. Minor, D. Filippetto, Structural Dynamics, 9, 064302, (2022).

10.1063/4.0000170

59

Robust and reliable actinic ptychographic imaging of highly periodic structures in EUV photomasks

B. Wang, N. Brooks, M. Tanksalvala, Y. Esashi, N. Jenkins, P. Johnsen, I. Binnie, G. Gui, Y. Shao, M. Murnane, H. Kapteyn, Photomask Technology 2022, 12293, 122930D, (2022).

10.1117/12.2641726

60

A closer look at spin textures

J. Miao, M. M. Murnane, Nature Nanotechnology, (2022).

10.1038/s41565-022-01262-6

61

Zwitterions in 3D Perovskites: Organosulfide-Halide Perovskites

J. Li, Z. Chen, S. Saha, J. K. Utterback, M. L. Aubrey, R. Yuan, H. L. Weaver, N. S. Ginsberg, K. W. Chapman, M. R. Filip, H. I. Karunadasa, Journal of the American Chemical Society, 144, 22403-22408, (2022).

10.1021/jacs.2c09382

62

Structures and comparison of endogenous 2-oxoglutarate and pyruvate dehydrogenase complexes from bovine kidney

S. Liu, X. Xia, J. Zhen, Z. Li, Z. ng Zhou, Cell Discovery, 8, 126, (2022).

10.1038/s41421-022-00487-y

63

Is a complete Mueller matrix necessary in biomedical imaging?

T. Novikova, J. C. Ramella-Roman, Optics Letters, 47, 5549, (2022).

10.1364/ol.471239

64

Super-resolved time-frequency measurements of coupled phonon dynamics in a 2D quantum material

C. Gentry, C. Liao, W. You, S. A. Ryan, B. Varner, X. Shi, M. Guan, T. Gray, D. Temple, S. Meng, M. Raschke, K. Rossnagel, H. C. Kapteyn, M. M. Murnane, E. Cating-Subramanian, Scientific Reports, 12, 19734, (2022).

10.1038/s41598-022-22055-w

65

Nanoscale heterogeneity of ultrafast many-body carrier dynamics in triple cation perovskites

J. Nishida, P. S. Chang, J. Y. Ye, P. Sharma, D. M. Wharton, S. C. Johnson, S. E. Shaheen, M. B. Raschke, Nature Communications, 13, 6582, (2022).

10.1038/s41467-022-33935-0

66

Instructor perspectives on the emergency transition to remote instruction of physics labs

A. Werth, J. R. Hoehn, K. Oliver, M. J. Fox, H. J. Lewandowski, Physical Review Physics Education Research, 18, 020129, (2022).

10.1103/physrevphyseducres.18.020129

67

High-Resolution Conductivity Mapping with STEM EBIC

W. Hubbard, H. Chan, B. C. Regan, International Symposium for Testing and Failure Analysis, istfa2022p0251, 251-253, (2022).

10.31399/asm.cp.istfa2022p0251

68

Isotropic reconstruction for electron tomography with deep learning

Y. Liu, H. Zhang, H. Wang, C. Tao, G. Bi, Z. ng Zhou, Nature Communications, 13, 6482, (2022).

10.1038/s41467-022-33957-8

69

Assessing student engagement with teamwork in an online, large-enrollment course-based undergraduate research experience in physics

A. Werth, K. Oliver, C. G. West, H. J. Lewandowski, Physical Review Physics Education Research, 18, 020128, (2022).

10.1103/physrevphyseducres.18.020128

70

Structural consequences of sequence variation in mammalian prion β2α2 loop segments

C. Glynn, E. Hernandez, M. Gallagher-Jones, J. Miao, C. J. Sigurdson, J. A. Rodriguez, Frontiers in Neuroscience, 16, (2022).

10.3389/fnins.2022.960322

71

Atomic model of vesicular stomatitis virus and mechanism of assembly

K. Zhou, Z. Si, P. Ge, J. Tsao, M. Luo, Z. ng Zhou, Nature Communications, 13, 5980, (2022).

10.1038/s41467-022-33664-4

72

Homogeneous, Micron-Scale High-Energy-Density Matter Generated by Relativistic Laser-Solid Interactions

N. F. Beier, H. H. Allison, P. P. Efthimion, K. A. Flippo, L. L. Gao, S. B. Hansen, K. K. Hill, R. R. Hollinger, M. M. Logantha, Y. Y. Musthafa, R. R. Nedbailo, V. V. Senthilkumaran, R. R. Shepherd, V. N. Shlyaptsev, H. H. Song, S. S. Wang, F. F. Dollar, J. J. Rocca, A. E. Hussein, Physical Review Letters, 129, 135001, (2022).

10.1103/physrevlett.129.135001

73

Observation of formation and local structures of metal-organic layers via complementary electron microscopy techniques

X. Peng, P. M. Pelz, Q. Zhang, P. Chen, L. Cao, Y. Zhang, H. Liao, H. Zheng, C. Wang, S. Sun, M. C. Scott, Nature Communications, 13, 5197, (2022).

10.1038/s41467-022-32330-z

74

Structural and Elastic Properties of Empty-Pore Metalattices Extracted via Nondestructive Coherent Extreme UV Scatterometry and Electron Tomography

J. L. Knobloch, B. McBennett, C. S. Bevis, S. Yazdi, T. D. Frazer, A. Adak, E. E. Nelson, J. N. Hernández-Charpak, H. Y. Cheng, A. J. Grede, P. Mahale, N. Nova, N. C. Giebink, T. E. Mallouk, J. V. Badding, H. C. Kapteyn, B. Abad, M. M. Murnane, ACS Applied Materials & Interfaces, 14, 41316-41327, (2022).

10.1021/acsami.2c09360

75

Chemical Shift Detection with Energy Dispersive Spectroscopy (EDS)

R. Jin, B. Zutter, B. C. Regan, M. Mecklenburg, Microscopy and Microanalysis, 27, 2068-2069, (2021).

10.1017/s1431927621007480

76

Atomic Structure of IglD Demonstrates Its Role as a Component of the Baseplate Complex of the Francisella Type VI Secretion System

X. Liu, D. L. Clemens, B. Lee, X. Yang, Z. ng Zhou, M. A. Horwitz, mBio, 13, (2022).

10.1128/mbio.01277-22

77

Electron Diffraction of 3D Molecular Crystals

A. Saha, S. S. Nia, J. A. Rodríguez, Chemical Reviews, 122, 13883-13914, (2022).

10.1021/acs.chemrev.1c00879

78

Roadmap on wavefront shaping and deep imaging in complex media

S. Gigan, O. Katz, H. de Aguiar, E. Andresen, A. Aubry, J. Bertolotti, E. Bossy, D. Bouchet, J. Brake, S. Brasselet, Y. Bromberg, H. Cao, T. Chaigne, Z. Cheng, W. Choi, T. Čižmár, M. Cui, V. Curtis, H. Defienne, M. Hofer, R. Horisaki, R. Horstmeyer, N. Ji, A. LaViolette, J. Mertz, C. Moser, A. Mosk, N. Pégard, R. Piestun, S. Popoff, D. Phillips, D. Psaltis, B. Rahmani, H. Rigneault, S. Rotter, L. Tian, I. Vellekoop, L. Waller, L. Wang, T. Weber, S. Xiao, C. Xu, A. Yamilov, C. Yang, H. Yılmaz, Journal of Physics: Photonics, 4, 042501, (2022).

10.1088/2515-7647/ac76f9

79

Temporal and spectral multiplexing for EUV multibeam ptychography with a high harmonic light source

N. J. Brooks, B. Wang, I. Binnie, M. Tanksalvala, Y. Esashi, J. L. Knobloch, Q. D. Nguyen, B. McBennett, N. W. Jenkins, G. Gui, Z. Zhang, H. C. Kapteyn, M. M. Murnane, C. S. Bevis, Optics Express, 30, 30331, (2022).

10.1364/oe.458955

80

A Multislice Approach to Quantify Laser-Induced Lattice Temperature from Ultrafast Electron Diffraction Measurements of Single-Crystal Films

D. Durham, K. Siddiqui, C. Ophus, A. Minor, D. Filippetto, Microscopy and Microanalysis, 28, 888-890, (2022).

10.1017/s1431927622003920

81

Separation of EBIC Modes with Two-Channel STEM EBIC

W. A. Hubbard, H. Chan, M. Mecklenburg, B. C. Regan, Microscopy and Microanalysis, 28, 2508-2509, (2022).

10.1017/s143192762200959x

82

Determining the Polarization Fraction of Thin Film Ferroelectric HZO with STEM EBIC

H. Chan, S. S. Fields, T. O'Neill, Y. Chen, W. A. Hubbard, J. F. Ihlefeld, B. C. Regan, Microscopy and Microanalysis, 28, 2270-2271, (2022).

10.1017/s1431927622008728

83

In Situ Transmission Kikuchi Diffraction Observation of Thin-Film GST Crystal Phase and Grain Evolution

Y. Chen, H. Chan, B. C. Regan, M. Mecklenburg, Microscopy and Microanalysis, 28, 2314-2315, (2022).

10.1017/s1431927622008893

84

Detecting Temperature-Induced Strain Changes using In Situ Transmission Kikuchi Diffraction

Y. Chen, J. J. Lodico, X. Ling, B. C. Regan, M. Mecklenburg, Microscopy and Microanalysis, 28, 576-577, (2022).

10.1017/s1431927622002884

85

Engagement in collaboration and teamwork using Google Colaboratory

A. Werth, K. A. Oliver, C. G. West, H. J. Lewandowski, 2022 Physics Education Research Conference Proceedings, 481-487, (2022).

10.1119/perc.2022.pr.werth

86

High-resolution, wavefront-sensing, full-field polarimetry of arbitrary beams using phase retrieval

M. N. Jacobs, Y. Esashi, N. W. Jenkins, N. J. Brooks, H. C. Kapteyn, M. M. Murnane, M. Tanksalvala, Optics Express, 30, 27967, (2022).

10.1364/oe.461658

87

Structure of Tetrahymena telomerase-bound CST with polymerase alpha-primase

Y. He, H. Song, H. Chan, B. Liu, Y. Wang, L. Sušac, Z. ng Zhou, J. Feigon, Nature, 608, 813-818, (2022).

10.1038/s41586-022-04931-7

88

Classifying handedness in chiral nanomaterials using label error robust deep learning

C. K. Groschner, A. J. Pattison, A. Ben-Moshe, A. ul Alivisatos, W. Theis, M. C. Scott, npj Computational Materials, 8, (2022).

10.1038/s41524-022-00822-7

89

Commissioning of an X-Band Cavity for Longitudinal Phase Space Linearization at UCLA PEGASUS Laboratory

P. Denham, P. Musumeci, A. Ody, Proceedings of the 13th International Particle Accelerator Conference, Thailand, (2022).

10.18429/JACOW-IPAC2022-THPOST040

90

Electrically controlling and optically observing the membrane potential of supported lipid bilayers

S. Yudovich, A. Marzouqe, J. Kantorovitsch, E. Teblum, T. Chen, J. Enderlein, E. W. Miller, S. Weiss, Biophysical Journal, 121, 2624-2637, (2022).

10.1016/j.bpj.2022.05.037

91

Structure, dynamics and assembly of the ankyrin complex on human red blood cell membrane

X. Xia, S. Liu, Z. ng Zhou, Nature Structural & Molecular Biology, (2022).

10.1038/s41594-022-00779-7

92

Graphics-processing-unit-accelerated Monte Carlo simulation of polarized light in complex three-dimensional media

S. Yan, S. L. Jacques, J. C. Ramella-Roman, Q. Fang, Journal of Biomedical Optics, 27, 083015-1, (2022).

10.1117/1.jbo.27.8.083015

93

Statistical parametrization of cell cytoskeleton reveals lung cancer cytoskeletal phenotype with partial EMT signature

A. Basu, M. K. Paul, M. Alioscha-Perez, A. Grosberg, H. Sahli, S. M. Dubinett, S. Weiss, Communications Biology, 5, 407, (2022).

10.1038/s42003-022-03358-0

94

Structural basis of RNA conformational switching in the transcriptional regulator 7SK RNP

Y. Yang, S. Liu, S. Egloff, C. D. Eichhorn, T. Hadjian, J. Zhen, T. Kiss, Z. ng Zhou, J. Feigon, Molecular Cell, 82, 1724-1736.e7, (2022).

10.1016/j.molcel.2022.03.001

95

Locations and in situ structure of the polymerase complex inside the virion of vesicular stomatitis virus

Z. Si, K. Zhou, J. Tsao, M. Luo, Z. ng Zhou, Proceedings of the National Academy of Sciences, 119, e2111948119, (2022).

10.1073/pnas.2111948119

96

Structure of active human telomerase with telomere shelterin protein TPP1

B. Liu, Y. He, Y. Wang, H. Song, Z. ng Zhou, J. Feigon, Nature, 604, 578-583, (2022).

10.1038/s41586-022-04582-8

97

Impacts on student learning, confidence, and affect in a remote, large-enrollment, course-based undergraduate research experience in physics

A. Werth, C. G. West, H. J. Lewandowski, Physical Review Physics Education Research, 18, 010129, (2022).

10.1103/physrevphyseducres.18.010129

98

Untangling the Mechanisms of Lattice Distortions in Biogenic Crystals across Scales

V. Schoeppler, P. K. Cook, C. Detlefs, R. Demichelis, I. Zlotnikov, Advanced Materials, 34, 2200690, (2022).

10.1002/adma.202200690

99

High-entropy nanoparticles: Synthesis-structure-property relationships and data-driven discovery

Y. Yao, Q. Dong, A. Brozena, J. Luo, J. Miao, M. Chi, C. Wang, I. G. Kevrekidis, Z. Ren, J. Greeley, G. Wang, A. Anapolsky, L. Hu, Science, 376, 6589, (2022).

10.1126/science.abn3103

100

Real-time reconstruction of high energy, ultrafast laser pulses using deep learning

M. Stanfield, J. Ott, C. Gardner, N. F. Beier, D. M. Farinella, C. A. Mancuso, P. Baldi, F. Dollar, Scientific Reports, 12, 5299, (2022).

10.1038/s41598-022-09041-y

STROBE Publications

2023