Publications

51

Morphological and mechanical characterization of a novel porous silicon membrane used in a lung-on-a-chip system

S. Genc, S. Thompson, O. Hill, L. Gislason, D. Rodriguez, F. Showme, A. Motler, S. M. Schreiner, A. Gestos, V. L. Ferguson, J. Jessing, MRS Advances, 8, 996-1003, (2023).

10.1557/s43580-023-00667-2

52

Hierarchical organization and assembly of the archaeal cell sheath from an amyloid-like protein

H. Wang, J. Zhang, D. Toso, S. Liao, F. Sedighian, R. Gunsalus, Z. Hong Zhou, Nature Communications, (2023).

10.1038/s41467-023-42368-2

53

A composite electrodynamic mechanism to reconcile spatiotemporally resolved exciton transport in quantum dot superlattices

R. Yuan, T. D. Roberts, R. M. Brinn, A. A. Choi, H. H. Park, C. Yan, J. C. Ondry, S. Khorasani, D. J. Masiello, K. Xu, A. P. Alivisatos, N. S. Ginsberg, Science Advances, 9, (2023).

10.1126/sciadv.adh2410

54

Design of Electrostatic Aberration Correctors for Scanning Transmission Electron Microscopy

S. Ribet, S. Zeltmann, K. Bustillo, R. Dhall, P. Denes, A. Minor, R. dos Reis, V. Dravid, C. Ophus, Microscopy and Microanalysis, 29, 1950-1960, (2023).

10.1093/micmic/ozad111

55

Investigating changes in student views of measurement uncertainty in an introductory physics lab course using clustering algorithms

A. Werth, B. Pollard, R. Hobbs, H. J. Lewandowski, Physical Review Physics Education Research, 19, 020146, (2023).

10.1103/physrevphyseducres.19.020146

56

Nondestructive, high-resolution, chemically specific 3D nanostructure characterization using extreme ultraviolet, coherent diffractive imaging reflectometry

M. Tanksalvala, Y. Esashi, C. L. Porter, N. W. Jenkins, B. Wang, Z. Zhang, G. P. Miley, N. Horiguchi, S. Yazdi, C. Liao, M. Gerrity, H. C. Kapteyn, M. M. Murnane, Frontiers in Optics + Laser Science 2023 (FiO, LS), LM1F.4, (2023).

10.1364/ls.2023.lm1f.4

57

Soft x-ray vector ptycho-tomography: a new quantitative vector nanoimaging method for spin textures in 3D

C. Liao, A. Rana, E. Iacocca, J. Zou, M. Pham, X. Lu, E. Cating Subramanian, Y. Lo, S. Ryan, C. Bevis, R. Karl, A. Glaid, J. Rable, P. Mahale, J. Hirst, T. Ostler, W. Liu, C. O’Leary, Y. Yu, K. Bustillo, H. Ohldag, D. Shapiro, S. Yazdi, T. Mallouk, S. J. Osher, H. Kapteyn, V. Crespi, J. V. Badding, Y. Tserkovnyak, M. M. Murnane, J. Miao, Spintronics XVI, 12656, 13, (2023).

10.1117/12.2679845

58

Coherent EUV Light Sources Based on High-Order Harmonic Generation: Principles and Applications in Nanotechnology

H. Kapteyn, M. M. Murnane, Y. Esashi, M. Tanksalvala, J. L. Knobloch, C. Liao, D. D. Hickstein, C. Bargsten, K. Dorney, J. Petersen, Photon Sources for Lithography and Metrology, 351, 1302, (2023).

59

High-fidelity ptychographic imaging of highly periodic structures enabled by vortex high harmonic beams

B. Wang, N. J. Brooks, P. Johnsen, N. W. Jenkins, Y. Esashi, I. Binnie, M. Tanksalvala, H. C. Kapteyn, M. M. Murnane, Optica, 10, 1245, (2023).

10.1364/optica.498619

60

Detecting, Distinguishing, and Spatiotemporally Tracking Photogenerated Charge and Heat at the Nanoscale

H. L. Weaver, C. M. Went, J. Wong, D. Jasrasaria, E. Rabani, H. A. Atwater, N. S. Ginsberg, ACS Nano, 17, 19011-19021, (2023).

10.1021/acsnano.3c04607

61

FAP106 is an interaction hub for assembling microtubule inner proteins at the cilium inner junction

M. M. Shimogawa, A. S. Wijono, H. Wang, J. Zhang, J. Sha, N. Szombathy, S. Vadakkan, P. Pelayo, K. Jonnalagadda, J. Wohlschlegel, Z. Hong Zhou, K. L. Hill, Nature Communications, 14, 5225, (2023).

10.1038/s41467-023-40230-z

62

Uncovering polar vortex structures by inversion of multiple scattering with a stacked Bloch wave model

S. E. Zeltmann, S. Hsu, H. G. Brown, S. Susarla, R. Ramesh, A. M. Minor, C. Ophus, Ultramicroscopy, 250, 113732, (2023).

10.1016/j.ultramic.2023.113732

63

Protein target highlights in CASP15: Analysis of models by structure providers

L. T. Alexander, J. Durairaj, A. Kryshtafovych, L. A. Abriata, Y. Bayo, G. Bhabha, C. Breyton, S. G. Caulton, J. Chen, S. Degroux, D. C. Ekiert, B. S. Erlandsen, P. L. Freddolino, D. Gilzer, C. Greening, J. M. Grimes, R. Grinter, M. Gurusaran, M. D. Hartmann, C. J. Hitchman, J. R. Keown, A. Kropp, P. Kursula, A. L. Lovering, B. Lemaitre, A. Lia, S. Liu, M. Logotheti, S. Lu, S. Markússon, M. D. Miller, G. Minasov, H. H. Niemann, F. Opazo, G. N. Phillips, O. R. Davies, S. Rommelaere, M. Rosas‐Lemus, P. Roversi, K. Satchell, N. Smith, M. A. Wilson, K. Wu, X. Xia, H. Xiao, W. Zhang, Z. Hong Zhou, K. Fidelis, M. Topf, J. Moult, T. Schwede, Proteins: Structure, Function, and Bioinformatics, 1-29, (2023).

10.1002/prot.26545

64

Beyond MicroED: Ab Initio Structure Elucidation using 4D-STEM

A. Saha, A. Pattison, M. Mecklenburg, A. Brewster, P. Ercius, J. Rodriguez, Microscopy and Microanalysis, 29, 309-310, (2023).

10.1093/micmic/ozad067.143

65

Disentangling Tilt and Polarization Measurements in 4D-STEM Measurements of a Multilayer by Inversion of a Stacked Bloch Wave Model

S. Zeltmann, S. Hsu, H. Brown, S. Susarla, A. Minor, C. Ophus, Microscopy and Microanalysis, 29, 256-257, (2023).

10.1093/micmic/ozad067.115

66

Phase Diversity in Ptychographic Reconstructions with a Programmable Phase Plate

S. Ribet, S. Zeltmann, G. Varnavides, R. dos Reis, V. Dravid, C. Ophus, Microscopy and Microanalysis, 29, 296-297, (2023).

10.1093/micmic/ozad067.137

67

Spectrum Imaging of a Lithium Ion Battery Anode Using Thin Fluid Cells

M. Mecklenburg, J. Lodico, H. Chan, Y. Chen, X. Ling, B. Regan, Microscopy and Microanalysis, 29, 672-673, (2023).

10.1093/micmic/ozad067.331

68

Observation of Simultaneous Successive Twinning Using Atomic Electron Tomography

P. Pelz, C. Groschner, A. Bruefach, C. Ophus, M. Scott, Microscopy and Microanalysis, 29, 707-708, (2023).

10.1093/micmic/ozad067.348

69

Mapping Conductivity in the TEM with SEEBIC

W. Hubbard, H. Chan, B. Regan, Microscopy and Microanalysis, 29, 1851-1852, (2023).

10.1093/micmic/ozad067.956

70

Emission-Based Temperature Mapping with STEM EBIC

W. Hubbard, M. Mecklenburg, H. Chan, B. Regan, Microscopy and Microanalysis, 29, 1608-1609, (2023).

10.1093/micmic/ozad067.825

71

Elucidating the Role of Cr Migration in Ni-Cr Exposed to Molten FLiNaK via STEM-Based Methods

S. Mills, R. Hayes, N. Bieberdorf, S. Zeltmann, A. Kennedy, R. Scarlat, M. Asta, A. Minor, Microscopy and Microanalysis, 29, 1505-1506, (2023).

10.1093/micmic/ozad067.774

72

Imaging the electron charge density in monolayer MoS2 at the Ångstrom scale

J. Martis, S. Susarla, A. Rayabharam, C. Su, T. Paule, P. Pelz, C. Huff, X. Xu, H. Li, M. Jaikissoon, V. Chen, E. Pop, K. Saraswat, A. Zettl, N. R. Aluru, R. Ramesh, P. Ercius, A. Majumdar, Nature Communications, 14, 4363, (2023).

10.1038/s41467-023-39304-9

73

Operando spectral imaging of the lithium ion battery’s solid-electrolyte interphase

J. J. Lodico, M. Mecklenburg, H. Chan, Y. Chen, X. Ling, B. C. Regan, Science Advances, 9, (2023).

10.1126/sciadv.adg5135

74

Two-color high-harmonic generation from relativistic plasma mirrors

N. F. Beier, F. F. Dollar, Physical Review E, 108, 015201, (2023).

10.1103/physreve.108.015201

75

Structural basis of gRNA stabilization and mRNA recognition in trypanosomal RNA editing

S. Liu, H. Wang, X. Li, F. Zhang, J. J. Lee, Z. Li, C. Yu, J. J. Hu, X. Zhao, T. Suematsu, A. L. Alvarez-Cabrera, Q. Liu, L. Zhang, L. Huang, I. Aphasizheva, R. Aphasizhev, Z. Hong Zhou, Science, 381, eadg4725, (2023).

10.1126/science.adg4725

76

Scanning transmission X-ray microscopy at the Advanced Light Source

T. Feggeler, A. Levitan, M. A. Marcus, H. Ohldag, D. A. Shapiro, Journal of Electron Spectroscopy and Related Phenomena, 267, 147381, (2023).

10.1016/j.elspec.2023.147381

77

In Situ and Emerging Transmission Electron Microscopy for Catalysis Research

H. Chao, K. Venkatraman, S. Moniri, Y. Jiang, X. Tang, S. Dai, W. Gao, J. Miao, M. Chi, Chemical Reviews, 123, 8347-8394, (2023).

10.1021/acs.chemrev.2c00880

78

Structure of LARP7 Protein p65–telomerase RNA Complex in Telomerase Revealed by Cryo-EM and NMR

Y. Wang, Y. He, Y. Wang, Y. Yang, M. Singh, C. D. Eichhorn, X. Cheng, Y. Jiang, Z. Hong Zhou, J. Feigon, Journal of Molecular Biology, 435, 168044, (2023).

10.1016/j.jmb.2023.168044

79

Coronal Heating as Determined by the Solar Flare Frequency Distribution Obtained by Aggregating Case Studies

Y. Wang, Y. He, Y. Wang, Y. Yang, M. Singh, C. D. Eichhorn, X. Cheng, Y. Jiang, Z. Hong Zhou, J. Feigon, The Astrophysical Journal, 948, (2023).

10.3847/1538-4357/accc89

80

Antenna-coupled infrared nanospectroscopy of intramolecular vibrational interaction

R. Wilcken, J. Nishida, J. F. Triana, A. John-Herpin, H. Altug, S. Sharma, F. Herrera, M. B. Raschke, Proceedings of the National Academy of Sciences, 120, e2220852120, (2023).

10.1073/pnas.2220852120

81

Evidence for Bootstrap Percolation Dynamics in a Photoinduced Phase Transition

T. Carbin, X. Zhang, A. B. Culver, H. Zhao, A. Zong, R. Acharya, C. J. Abbamonte, R. Roy, G. Cao, A. Kogar, Physical Review Letters, 130, 186902, (2023).

10.1103/physrevlett.130.186902

82

Nonadditive Interactions Unlock Small-Particle Mobility in Binary Colloidal Monolayers

J. G. Raybin, R. B. Wai, N. S. Ginsberg, ACS Nano, 17, 8303-8314, (2023).

10.1021/acsnano.2c12668

83

Relationships between Compositional Heterogeneity and Electronic Spectra of (Ga1-xZnX)(N1-xOX) Nanocrystals Revealed by Valence Electron Energy Loss Spectroscopy

B. F. Hammel, L. G. Hall, L. M. Pellows, O. M. Pearce, P. Tongying, S. Yazdi, G. Dukovic, The Journal of Physical Chemistry C, 127, 7762-7771, (2023).

10.1021/acs.jpcc.3c00572

84

CryoEM reveals oligomeric isomers of a multienzyme complex and assembly mechanics

J. J. Lee, Y. Liu, J. J. Hu, I. Aphasizheva, R. Aphasizhev, Z. ng Zhou, Journal of Structural Biology: X, 7, 100088, (2023).

10.1016/j.yjsbx.2023.100088

85

Accurate real space iterative reconstruction (RESIRE) algorithm for tomography

M. Pham, Y. Yuan, A. Rana, S. Osher, J. Miao, Scientific Reports, 13, (2023).

10.1038/s41598-023-31124-7

86

Evaluation protocol for revealing magnonic contrast in TR-STXM measurements

B. Zingsem, T. Feggeler, R. Meckenstock, D. Spoddig, T. Schaffers, S. Pile, H. Ohldag, M. Farle, H. Wende, A. Ney, K. Ollefs, AIP Advances, 13, 045020, (2023).

10.1063/5.0145753

87

Cryo-EM structure of amyloid fibril formed by α-synuclein hereditary A53E mutation reveals a distinct protofilament interface

C. Sun, K. Zhou, P. DePaola, W. Shin, T. Hillyer, M. R. Sawaya, R. Zhu, C. Peng, Z. Hong Zhou, L. Jiang, Journal of Biological Chemistry, 299, 104566, (2023).

10.1016/j.jbc.2023.104566

88

Student experiences with authentic research in a remote, introductory course-based undergraduate research experience in physics

K. A. Oliver, A. Werth, H. J. Lewandowski, Physical Review Physics Education Research, 19, 010124, (2023).

10.1103/physrevphyseducres.19.010124

89

Operando Label-Free Optical Imaging of Solution-Phase Ion Transport and Electrochemistry

J. K. Utterback, A. J. King, L. Belman-Wells, D. M. Larson, L. M. Hamerlynck, A. Z. Weber, N. S. Ginsberg, ACS Energy Letters, 8, 1785-1792, (2023).

10.1021/acsenergylett.3c00129

90

Experimental Characterization of Photoemission from Plasmonic Nanogroove Arrays

C. M. Pierce, D. B. Durham, F. Riminucci, S. Dhuey, I. Bazarov, J. Maxson, A. M. Minor, D. Filippetto, Physical Review Applied, 19, 034034, (2023).

10.1103/physrevapplied.19.034034

91

Excitation Intensity-Dependent Quantum Yield of Semiconductor Nanocrystals

S. Ghosh, U. Ross, A. M. Chizhik, Y. Kuo, B. Jeong, W. Bae, K. Park, J. Li, D. Oron, S. Weiss, J. Enderlein, A. I. Chizhik, The Journal of Physical Chemistry Letters, 14, 2702-2707, (2023).

10.1021/acs.jpclett.3c00143

92

Universal Behavior of Highly Confined Heat Flow in Semiconductor Nanosystems: From Nanomeshes to Metalattices

B. McBennett, A. Beardo, E. E. Nelson, B. Abad, T. D. Frazer, A. Adak, Y. Esashi, B. Li, H. C. Kapteyn, M. M. Murnane, J. L. Knobloch, Nano Letters, 23, 2129-2136, (2023).

10.1021/acs.nanolett.2c04419

93

Students’ views about experimental physics in a large-enrollment introductory lab focused on experimental scientific practices

N. Sulaiman, A. Werth, H. J. Lewandowski, Physical Review Physics Education Research, 19, 010116, (2023).

10.1103/physrevphyseducres.19.010116

94

Nanoscale mapping of point defect concentrations with 4D-STEM

S. H. Mills, S. E. Zeltmann, P. Ercius, A. A. Kohnert, B. P. Uberuaga, A. M. Minor, Acta Materialia, 1, 118721, (2023).

10.1016/j.actamat.2023.118721

95

Identification of Unknown Nanofabrication Chemicals Using Raman Spectroscopy and Deep Learning

N. Theobald, D. Ledvina, K. Kukula, S. Maines, K. Hasz, M. Raschke, J. Crawford, J. Jessing, Y. Li, IEEE Sensors Journal, 23, 7910-7916, (2023).

10.1109/jsen.2023.3249668

96

Structural basis of HIV-1 Vif-mediated E3 ligase targeting of host APOBEC3H

F. Ito, A. L. Alvarez-Cabrera, K. Kim, Z. ng Zhou, X. S. Chen, Nature Communications, 14, 5241, (2023).

10.1038/s41467-023-40955-x

97

Fragment-Based Ab Initio Phasing of Peptidic Nanocrystals by MicroED

L. S. Richards, M. D. Flores, C. Millán, C. Glynn, C. Zee, M. R. Sawaya, M. Gallagher-Jones, R. J. Borges, I. Usón, J. A. Rodriguez, ACS Bio & Med Chem Au, 3, 201-210, (2023).

10.1021/acsbiomedchemau.2c00082

98

Native structure of mosquito salivary protein uncovers domains relevant to pathogen transmission

S. Liu, X. Xia, E. Calvo, Z. Hong Zhou, Nature Communications, 14, 899, (2023).

10.1038/s41467-023-36577-y

99

Asymmetric reconstruction of the aquareovirus core at near-atomic resolution and mechanism of transcription initiation

A. Stevens, Y. Cui, S. Shivakoti, Z. Zhou, Protein & Cell, 14, 1-5, (2023).

10.1093/procel/pwad002

100

Three-dimensional topological magnetic monopoles and their interactions in a ferromagnetic meta-lattice

A. Rana, C. Liao, E. Iacocca, J. Zou, M. Pham, X. Lu, E. Subramanian, Y. Lo, S. A. Ryan, C. S. Bevis, R. M. Karl, A. J. Glaid, J. Rable, P. Mahale, J. Hirst, T. Ostler, W. Liu, C. M. O’Leary, Y. Yu, K. Bustillo, H. Ohldag, D. A. Shapiro, S. Yazdi, T. E. Mallouk, S. J. Osher, H. C. Kapteyn, V. H. Crespi, J. V. Badding, Y. Tserkovnyak, M. M. Murnane, J. Miao, Nature Nanotechnology, 18, 227–232, (2023).

10.1038/s41565-022-01311-0

STROBE Publications

2023