STROBE Publications

Showing publications 351 – 400 of 405

2018

351

Cryo-EM of full-length α-synuclein reveals fibril polymorphs with a common structural kernel

B. Li, P. Ge, K. A. Murray, P. Sheth, M. Zhang, G. Nair, M. R. Sawaya, W. Shin, D. R. Boyer, S. Ye, D. S. Eisenberg, Z. Hong Zhou, L. Jiang, Nature Communications, 9, 3609, (2018).

10.1038/s41467-018-05971-2

352

Malaria parasite translocon structure and mechanism of effector export

C. Ho, J. R. Beck, M. Lai, Y. Cui, D. E. Goldberg, P. F. Egea, Z. Hong Zhou, Nature, 561, 70 - 75, (2018).

10.1038/s41586-018-0469-4

353

Phase-transition–induced p-n junction in single halide perovskite nanowire

Q. Kong, W. Lee, M. Lai, C. G. Bischak, G. Gao, A. B. Wong, T. Lei, Y. Yu, L. Wang, N. S. Ginsberg, P. Yang, Proceedings of the National Academy of Sciences, 115, 8889-8894, (2018).

10.1073/pnas.1806515115

354

Cryo-EM structure of the human α5β3 GABAA receptor

S. Liu, L. Xu, F. Guan, Y. Liu, Y. Cui, Q. Zhang, X. Zheng, G. Bi, Z. Hong Zhou, X. Zhang, S. Ye, Cell Research, 28, 958-961, (2018).

10.1038/s41422-018-0077-8

355

Building atomic models based on near atomic resolution cryoEM maps with existing tools

I. Yu, L. Nguyen, J. Avaylon, K. Wang, M. Lai, Z. Hong Zhou, Journal of Structural Biology, 204, 313-318, (2018).

10.1016/j.jsb.2018.08.004

356

Nanoimaging and Control of Molecular Vibrations through Electromagnetically Induced Scattering Reaching the Strong Coupling Regime

E. A. Muller, B. Pollard, H. A. Bechtel, R. Adato, D. Etezadi, H. Altug, M. B. Raschke, ACS Photonics, 5, 3594-3600, (2018).

10.1021/acsphotonics.8b00425

357

In Situ Structures of the Polymerase Complex and RNA Genome Show How Aquareovirus Transcription Machineries Respond to Uncoating

K. Ding, L. Nguyen, Z. Hong Zhou, Journal of Virology, 92, e00774-18, (2018).

10.1128/jvi.00774-18

358

Aberration recovery by imaging a weak diffuser

G. Gunjala, S. Sherwin, A. Shanker, L. Waller, Optics Express, 26, 21054, (2018).

10.1364/oe.26.021054

359

Block Matching Local SVD Operator Based Sparsity and TV Regularization for Image Denoising

J. Liu, S. Osher, Journal of Scientific Computing, 78, 607-624, (2018).

10.1007/s10915-018-0785-8

360

Quantitative characterization of high temperature oxidation using electron tomography and energy-dispersive X-ray spectroscopy

J. Zhou, M. Taylor, G. A. Melinte, A. J. Shahani, C. C. Dharmawardhana, H. Heinz, P. W. Voorhees, J. H. Perepezko, K. Bustillo, P. Ercius, J. Miao, Scientific Reports, 8, 10239, (2018).

10.1038/s41598-018-28348-3

361

Tunable Polaron Distortions Control the Extent of Halide Demixing in Lead Halide Perovskites

C. G. Bischak, A. B. Wong, E. Lin, D. T. Limmer, P. Yang, N. S. Ginsberg, The Journal of Physical Chemistry Letters, 9, 3998-4005, (2018).

10.1021/acs.jpclett.8b01512

362

Super-Resolution Imaging of Clickable Graphene Nanoribbons Decorated with Fluorescent Dyes

D. Joshi, M. Hauser, G. Veber, A. Berl, K. Xu, F. R. Fischer, Journal of the American Chemical Society, 140, 9574-9580, (2018).

10.1021/jacs.8b04679

363

Compressed sensing FTIR nano-spectroscopy and nano-imaging

B. Kästner, F. Schmähling, A. Hornemann, G. Ulrich, A. Hoehl, M. Kruskopf, K. Pierz, M. B. Raschke, G. Wübbeler, C. Elster, Optics Express, 26, 18115, (2018).

10.1364/oe.26.018115

364

Accumulation of Dense Core Vesicles in Hippocampal Synapses Following Chronic Inactivity

C. Tao, Y. Liu, Z. Hong Zhou, P. Lau, G. Bi, Frontiers in Neuroanatomy, 12, (2018).

10.3389/fnana.2018.00048

365

Adaptive wavefront shaping for controlling nonlinear multimode interactions in optical fibres

O. Tzang, A. M. Caravaca-Aguirre, K. Wagner, R. Piestun, Nature Photonics, 12, 368–374, (2018).

10.1038/s41566-018-0167-7

366

Understanding Chemical Bonding in Alloys and the Representation in Atomistic Simulations

J. Liu, E. Tennessen, J. Miao, Y. Huang, J. M. Rondinelli, H. Heinz, The Journal of Physical Chemistry C, 122, 14996-15009, (2018).

10.1021/acs.jpcc.8b01891

367

Single-shot 3D coherent diffractive imaging of core-shell nanoparticles with elemental specificity

A. Pryor, A. Rana, R. Xu, J. A. Rodriguez, Y. Yang, M. Gallagher-Jones, H. Jiang, K. Kanhaiya, M. Nathanson, J. Park, S. Kim, S. Kim, D. Nam, Y. Yue, J. Fan, Z. Sun, B. Zhang, D. F. Gardner, C. Dias, Y. Joti, T. Hatsui, T. Kameshima, Y. Inubushi, K. Tono, J. Lee, M. Yabashi, C. Song, T. Ishikawa, H. C. Kapteyn, M. M. Murnane, H. Heinz, J. Miao, Scientific Reports, 8, 8284, (2018).

10.1038/s41598-018-26182-1

368

Structure of Telomerase with Telomeric DNA

J. Jiang, Y. Wang, L. Sušac, H. Chan, R. Basu, Z. Hong Zhou, J. Feigon, Cell, 173, 1179-1190.e13, (2018).

10.1016/j.cell.2018.04.038

369

Far Infrared Synchrotron Near-Field Nanoimaging and Nanospectroscopy

O. Khatib, H. A. Bechtel, M. C. Martin, M. B. Raschke, G. ce Carr, ACS Photonics, 5, 2773-2779, (2018).

10.1021/acsphotonics.8b00565

370

In situ coherent diffractive imaging

Y. Lo, L. Zhao, M. Gallagher-Jones, A. Rana, J. J. Lodico, W. Xiao, B. C. Regan, J. Miao, Nature Communications, 9, (2018).

10.1038/s41467-018-04259-9

371

Analysis of Global and Site-Specific Radiation Damage in Cryo-EM

J. Hattne, D. Shi, C. Glynn, C. Zee, M. Gallagher-Jones, M. W. Martynowycz, J. A. Rodriguez, T. Gonen, Structure, 26, 759-766.e4, (2018).

10.1016/j.str.2018.03.021

372

Students’ flexible use of ontologies and the value of tentative reasoning: Examples of conceptual understanding in three canonical topics of quantum mechanics

J. R. Hoehn, N. D. Finkelstein, Physical Review Physics Education Research, 14, 010122, (2018).

10.1103/physrevphyseducres.14.010122

373

Structure of the herpes simplex virus 1 capsid with associated tegument protein complexes

X. Dai, Z. Hong Zhou, Science, 360, eaao7298, (2018).

10.1126/science.aao7298

374

Atomic Structure of the E2 Inner Core of Human Pyruvate Dehydrogenase Complex

J. Jiang, F. L. Baiesc, Y. Hiromasa, X. Yu, W. Hui, X. Dai, T. E. Roche, Z. Hong Zhou, Biochemistry, 57, 2325-2334, (2018).

10.1021/acs.biochem.8b00357

375

Spectrally Resolved and Functional Super-resolution Microscopy via Ultrahigh-Throughput Single-Molecule Spectroscopy

R. Yan, S. Moon, S. J. Kenny, K. Xu, Accounts of Chemical Research, 51, 697-705, (2018).

10.1021/acs.accounts.7b00545

376

Long-Lived Correlated Triplet Pairs in a π-Stacked Crystalline Pentacene Derivative

B. D. Folie, J. B. Haber, S. Refaely-Abramson, J. B. Neaton, N. S. Ginsberg, Journal of the American Chemical Society, 140, 2326-2335, (2018).

10.1021/jacs.7b12662

377

Intercalation events visualized in single microcrystals of graphite

E. R. White, J. J. Lodico, B. C. Regan, Nature Communications, 1969, (2017).

10.1038/s41467-017-01787-8

378

Sub-ångström cryo-EM structure of a prion protofibril reveals a polar clasp

M. Gallagher-Jones, C. Glynn, D. R. Boyer, M. W. Martynowycz, E. Hernandez, J. Miao, C. Zee, I. V. Novikova, L. Goldschmidt, H. T. McFarlane, G. F. Helguera, J. E. Evans, M. R. Sawaya, D. Cascio, D. S. Eisenberg, T. Gonen, J. A. Rodriguez, Nature Structural & Molecular Biology, 25, 131-134, (2018).

10.1038/s41594-017-0018-0

379

Membrane insertion of—and membrane potential sensing by—semiconductor voltage nanosensors: Feasibility demonstration

K. Park, Y. Kuo, V. Shvadchak, A. Ingargiola, X. Dai, L. Hsiung, W. Kim, H. Zhou, P. Zou, A. J. Levine, J. Li, S. Weiss, Science Advances, 4, e1601453, (2018).

10.1126/sciadv.1601453

380

Nanoimaging of Electronic Heterogeneity in Bi2Se3 and Sb2Te3 Nanocrystals

X. Lu, O. Khatib, X. Du, J. Duan, W. Wei, X. Liu, H. A. Bechtel, F. D'Apuzzo, M. Yan, A. Buyanin, Q. Fu, J. Chen, M. Salmeron, J. Zeng, M. B. Raschke, P. Jiang, X. Bao, Advanced Electronic Materials, 4, 1700377, (2017).

10.1002/aelm.201700377

381

Thermometry of Silicon Nanoparticles

M. Mecklenburg, B. Zutter, B. C. Regan, Physical Review Applied, 9, 014005, (2018).

10.1103/physrevapplied.9.014005

382

Multiple beam ptychography for large field-of-view, high throughput, quantitative phase contrast imaging

C. Bevis, R. Karl, J. Reichanadter, D. F. Gardner, C. Porter, E. Shanblatt, M. Tanksalvala, G. F. Mancini, H. Kapteyn, M. Murnane, D. Adams, Ultramicroscopy, 184, 164-171, (2018).

10.1016/j.ultramic.2017.08.018

383

Structure and mutagenesis reveal essential capsid protein interactions for KSHV replication

X. Dai, D. Gong, H. Lim, J. Jih, T. Wu, R. Sun, Z. Hong Zhou, Nature, 553, 521-525, (2018).

10.1038/nature25438

2017

384

Structure of the yeast spliceosomal postcatalytic P complex

S. Liu, X. Li, L. Zhang, J. Jiang, R. C. Hill, Y. Cui, K. C. Hansen, Z. Hong Zhou, R. Zhao, Science, 358, 1278-1283, (2017).

10.1126/science.aar3462

385

Catastrophic disassembly of actin filaments via Mical-mediated oxidation

E. E. Grintsevich, P. Ge, M. R. Sawaya, H. Yesilyurt, J. R. Terman, Z. Hong Zhou, E. Reisler, Nature Communications, 8, (2017).

10.1038/s41467-017-02357-8

386

General-purpose, wide field-of-view reflection imaging with a tabletop 13  nm light source

C. L. Porter, M. Tanksalvala, M. Gerrity, G. Miley, X. Zhang, C. Bevis, E. Shanblatt, R. Karl, M. M. Murnane, D. E. Adams, H. C. Kapteyn, Optica, 4, 1552-1557, (2017).

10.1364/optica.4.001552

387

3D image scanning microscopy with engineered excitation and detection

C. Roider, R. Piestun, A. Jesacher, Optica, 4, 1373, (2017).

10.1364/optica.4.001373

388

A streaming multi-GPU implementation of image simulation algorithms for scanning transmission electron microscopy

A. Pryor, C. Ophus, J. Miao, Advanced Structural and Chemical Imaging, 3, 15, (2017).

10.1186/s40679-017-0048-z

389

Low Dimensional Manifold Model for Image Processing

S. Osher, Z. Shi, W. Zhu, SIAM Journal on Imaging Sciences, 10, 1669-1690, (2017).

10.1137/16m1058686

390

Conformation-Directed Formation of Self-Healing Diblock Copolypeptide Hydrogels via Polyion Complexation

Y. Sun, A. L. Wollenberg, T. O’Shea, Y. Cui, Z. Hong Zhou, M. V. Sofroniew, T. J. Deming, Journal of the American Chemical Society, 139, 15114-15121, (2017).

10.1021/jacs.7b08190

391

Noninvasive Cathodoluminescence-Activated Nanoimaging of Dynamic Processes in Liquids

C. G. Bischak, R. B. Wai, C. Cherqui, J. A. Busche, S. C. Quillin, C. L. Hetherington, Z. Wang, C. D. Aiello, D. G. Schlom, S. Aloni, D. nk Ogletree, D. J. Masiello, N. S. Ginsberg, ACS Nano, 11, 10583-10590, (2017).

10.1021/acsnano.7b06081

392

Resolving ultrafast exciton migration in organic solids at the nanoscale

S. B. Penwell, L. S. Ginsberg, R. Noriega, N. S. Ginsberg, Nature Materials, 16, 1136-1141, (2017).

10.1038/nmat4975

393

Atomic structure of the human cytomegalovirus capsid with its securing tegument layer of pp150

X. Yu, J. Jih, J. Jiang, Z. Hong Zhou, Science, 356, eaam6892, (2017).

10.1126/science.aam6892

394

Reliable computational design of biological-inorganic materials to the large nanometer scale using Interface-FF

C. C. Dharmawardhana, K. Kanhaiya, T. Lin, A. Garley, M. R. Knecht, J. Zhou, J. Miao, H. Heinz, Molecular Simulation, 43, 1394-1405, (2017).

10.1080/08927022.2017.1332414

395

Correlative cellular ptychography with functionalized nanoparticles at the Fe L-edge

M. Gallagher-Jones, C. Dias, A. Pryor, K. Bouchmella, L. Zhao, Y. Lo, M. Cardoso, D. Shapiro, J. Rodriguez, J. Miao, Scientific Reports, 4757, (2017).

10.1038/s41598-017-04784-5

396

Enhanced information content for three-dimensional localization and tracking using the double-helix point spread function with variable-angle illumination epifluorescence microscopy

D. Wang, A. Agrawal, R. Piestun, D. K. Schwartz, Applied Physics Letters, 110, 211107, (2017).

10.1063/1.4984133

397

GENFIRE: A generalized Fourier iterative reconstruction algorithm for high-resolution 3D imaging

A. Pryor, Y. Yang, A. Rana, M. Gallagher-Jones, J. Zhou, Y. Lo, G. Melinte, W. Chiu, J. A. Rodriguez, J. Miao, Scientific Reports, 7, 10409 , (2017).

10.1038/s41598-017-09847-1

398

Sub-wavelength coherent imaging of periodic samples using a 13.5 nm tabletop high harmonic light source

D. F. Gardner, M. Tanksalvala, E. R. Shanblatt, X. Zhang, B. R. Galloway, C. L. Porter, R. Karl Jr, C. Bevis, D. E. Adams, H. C. Kapteyn, M. M. Murnane, G. F. Mancini, Nature Photonics, 11, 259-263, (2017).

10.1038/nphoton.2017.33

399

Deciphering chemical order/disorder and material properties at the single-atom level

Y. Yang, C. Chen, M. C. Scott, C. Ophus, R. Xu, A. Pryor, L. Wu, F. Sun, W. Theis, J. Zhou, M. Eisenbach, P. C. Kent, R. F. Sabirianov, H. Zeng, P. Ercius, J. Miao, Nature, 542, 75-79, (2017).

10.1038/nature21042

400

Double-shot MeV electron diffraction and microscopy

P. P. Musumeci, D. D. Cesar, J. J. Maxson, Structural Dynamics, 4, 044025, (2017).

10.1063/1.4983390