STROBE Publications

Showing publications 351 – 400 of 422

2019

351

Focusing and scanning through scattering media in microseconds

D. Feldkhun, O. Tzang, K. H. Wagner, R. Piestun, Optica, 6, 72, (2019).

10.1364/optica.6.000072

352

Blended coarse gradient descent for full quantization of deep neural networks

P. Yin, S. Zhang, J. Lyu, S. Osher, Y. Qi, J. Xin, Research in the Mathematical Sciences, 6, 14, (2019).

10.1007/s40687-018-0177-6

353

Atomic structures of enterovirus D68 in complex with two monoclonal antibodies define distinct mechanisms of viral neutralization

Q. Zheng, R. Zhu, L. Xu, M. He, X. Yan, D. Liu, Z. Yin, Y. Wu, Y. Li, L. Yang, W. Hou, S. Li, Z. Li, Z. Chen, Z. Li, H. Yu, Y. Gu, J. Zhang, T. S. Baker, Z. Hong Zhou, B. S. Graham, T. Cheng, S. Li, N. Xia, Nature Microbiology, 4, 124-133, (2018).

10.1038/s41564-018-0275-7

2018

354

Ptychographic amplitude and phase reconstruction of bichromatic vortex beams

Y. Esashi, C. T. Liao, B. Wang, N. Brooks, K. M. Dorney, C. Hernández-García, H. Kapteyn, D. Adams, M. Murnane, Optics Express, 26, 34007, (2018).

10.1364/oe.26.034007

355

Quantitative differential phase contrast (DPC) microscopy with computational aberration correction

M. Chen, Z. F. Phillips, L. Waller, Optics Express, 26, 32888-32899, (2018).

10.1364/oe.26.032888

356

Different functional states of fusion protein gB revealed on human cytomegalovirus by cryo electron tomography with Volta phase plate

Z. Si, J. Zhang, S. Shivakoti, I. Atanasov, C. Tao, W. H. Hui, K. Zhou, X. Yu, W. Li, M. Luo, G. Bi, Z. Hong Zhou, PLOS Pathogens, 14, e1007452, (2018).

10.1371/journal.ppat.1007452

357

Atomic-Scale Structure and Stress Release Mechanism in Core–Shell Nanoparticles

M. Nathanson, K. Kanhaiya, A. Pryor, J. Miao, H. Heinz, ACS Nano, 12, 12296 - 12304, (2018).

10.1021/acsnano.8b06118

358

Correlative 3D x-ray fluorescence and ptychographic tomography of frozen-hydrated green algae

J. Deng, Y. Lo, M. Gallagher-Jones, S. Chen, A. Pryor, Q. Jin, Y. Hong, Y. G. Nashed, S. Vogt, J. Miao, C. Jacobsen, Science Advances, 4, eaau4548, (2018).

10.1126/sciadv.aau4548

359

STEM Imaging with Beam-Induced Hole and Secondary Electron Currents

W. A. Hubbard, M. Mecklenburg, H. Chan, B. C. Regan, Physical Review Applied, 10, (2018).

10.1103/physrevapplied.10.044066

360

Full-field imaging of thermal and acoustic dynamics in an individual nanostructure using tabletop high harmonic beams

R. M. Karl, G. F. Mancini, J. L. Knobloch, T. D. Frazer, J. N. Hernandez-Charpak, B. Abad, D. F. Gardner, E. R. Shanblatt, M. Tanksalvala, C. L. Porter, C. S. Bevis, D. E. Adams, H. C. Kapteyn, M. M. Murnane, Science Advances, 4, eaau4295, (2018).

10.1126/sciadv.aau4295

361

Motion-resolved quantitative phase imaging

M. Kellman, M. Chen, Z. F. Phillips, M. Lustig, L. Waller, Biomedical Optics Express, 9, 5456, (2018).

10.1364/boe.9.005456

362

Characterizing the Quantum-Confined Stark Effect in Semiconductor Quantum Dots and Nanorods for Single-Molecule Electrophysiology

Y. Kuo, J. Li, X. Michalet, A. Chizhik, N. Meir, O. Bar-Elli, E. Chan, D. Oron, J. Enderlein, S. Weiss, ACS Photonics, 5, 4788-4800, (2018).

10.1021/acsphotonics.8b00617

363

Structural insights on TRPV5 gating by endogenous modulators

T. T. Hughes, R. A. Pumroy, A. Yazici, M. A. Kasimova, E. C. Fluck, K. W. Huynh, A. Samanta, S. K. Molugu, Z. Hong Zhou, V. Carnevale, T. Rohacs, V. Y. Moiseenkova-Bell, Nature Communications, 9, 4198, (2018).

10.1038/s41467-018-06753-6

364

Dynamic 2D implementation of 3D diffractive optics

H. Wang, R. Piestun, Optica, 5, 1220, (2018).

10.1364/optica.5.001220

365

Discovery and structural characterization of a therapeutic antibody against coxsackievirus A10

R. Zhu, L. Xu, Q. Zheng, Y. Cui, S. Li, M. He, Z. Yin, D. Liu, S. Li, Z. Li, Z. Chen, H. Yu, Y. Que, C. Liu, Z. Kong, J. Zhang, T. S. Baker, X. Yan, Z. Hong Zhou, T. Cheng, N. Xia, Science Advances, 4, eaat7459, (2018).

10.1126/sciadv.aat7459

366

Synergizing superresolution optical fluctuation imaging with single molecule localization microscopy

S. Schidorsky, X. Yi, Y. Razvag, J. Sajman, K. Hermon, S. Weiss, E. Sherman, Methods and Applications in Fluorescence, 6, 045008, (2018).

10.1088/2050-6120/aadc2b

367

Electron Ghost Imaging

S. S. Li, F. F. Cropp, K. K. Kabra, T. J. Lane, G. G. Wetzstein, P. P. Musumeci, D. D. Ratner, Physical Review Letters, 121, 114801, (2018).

10.1103/physrevlett.121.114801

368

Cryo-EM of full-length α-synuclein reveals fibril polymorphs with a common structural kernel

B. Li, P. Ge, K. A. Murray, P. Sheth, M. Zhang, G. Nair, M. R. Sawaya, W. Shin, D. R. Boyer, S. Ye, D. S. Eisenberg, Z. Hong Zhou, L. Jiang, Nature Communications, 9, 3609, (2018).

10.1038/s41467-018-05971-2

369

Malaria parasite translocon structure and mechanism of effector export

C. Ho, J. R. Beck, M. Lai, Y. Cui, D. E. Goldberg, P. F. Egea, Z. Hong Zhou, Nature, 561, 70 - 75, (2018).

10.1038/s41586-018-0469-4

370

Phase-transition–induced p-n junction in single halide perovskite nanowire

Q. Kong, W. Lee, M. Lai, C. G. Bischak, G. Gao, A. B. Wong, T. Lei, Y. Yu, L. Wang, N. S. Ginsberg, P. Yang, Proceedings of the National Academy of Sciences, 115, 8889-8894, (2018).

10.1073/pnas.1806515115

371

Cryo-EM structure of the human α5β3 GABAA receptor

S. Liu, L. Xu, F. Guan, Y. Liu, Y. Cui, Q. Zhang, X. Zheng, G. Bi, Z. Hong Zhou, X. Zhang, S. Ye, Cell Research, 28, 958-961, (2018).

10.1038/s41422-018-0077-8

372

Building atomic models based on near atomic resolution cryoEM maps with existing tools

I. Yu, L. Nguyen, J. Avaylon, K. Wang, M. Lai, Z. Hong Zhou, Journal of Structural Biology, 204, 313-318, (2018).

10.1016/j.jsb.2018.08.004

373

Nanoimaging and Control of Molecular Vibrations through Electromagnetically Induced Scattering Reaching the Strong Coupling Regime

E. A. Muller, B. Pollard, H. A. Bechtel, R. Adato, D. Etezadi, H. Altug, M. B. Raschke, ACS Photonics, 5, 3594-3600, (2018).

10.1021/acsphotonics.8b00425

374

In Situ Structures of the Polymerase Complex and RNA Genome Show How Aquareovirus Transcription Machineries Respond to Uncoating

K. Ding, L. Nguyen, Z. Hong Zhou, Journal of Virology, 92, e00774-18, (2018).

10.1128/jvi.00774-18

375

Aberration recovery by imaging a weak diffuser

G. Gunjala, S. Sherwin, A. Shanker, L. Waller, Optics Express, 26, 21054, (2018).

10.1364/oe.26.021054

376

Block Matching Local SVD Operator Based Sparsity and TV Regularization for Image Denoising

J. Liu, S. Osher, Journal of Scientific Computing, 78, 607-624, (2018).

10.1007/s10915-018-0785-8

377

Tunable Polaron Distortions Control the Extent of Halide Demixing in Lead Halide Perovskites

C. G. Bischak, A. B. Wong, E. Lin, D. T. Limmer, P. Yang, N. S. Ginsberg, The Journal of Physical Chemistry Letters, 9, 3998-4005, (2018).

10.1021/acs.jpclett.8b01512

378

Quantitative characterization of high temperature oxidation using electron tomography and energy-dispersive X-ray spectroscopy

J. Zhou, M. Taylor, G. A. Melinte, A. J. Shahani, C. C. Dharmawardhana, H. Heinz, P. W. Voorhees, J. H. Perepezko, K. Bustillo, P. Ercius, J. Miao, Scientific Reports, 8, 10239, (2018).

10.1038/s41598-018-28348-3

379

Super-Resolution Imaging of Clickable Graphene Nanoribbons Decorated with Fluorescent Dyes

D. Joshi, M. Hauser, G. Veber, A. Berl, K. Xu, F. R. Fischer, Journal of the American Chemical Society, 140, 9574-9580, (2018).

10.1021/jacs.8b04679

380

Compressed sensing FTIR nano-spectroscopy and nano-imaging

B. Kästner, F. Schmähling, A. Hornemann, G. Ulrich, A. Hoehl, M. Kruskopf, K. Pierz, M. B. Raschke, G. Wübbeler, C. Elster, Optics Express, 26, 18115, (2018).

10.1364/oe.26.018115

381

Accumulation of Dense Core Vesicles in Hippocampal Synapses Following Chronic Inactivity

C. Tao, Y. Liu, Z. Hong Zhou, P. Lau, G. Bi, Frontiers in Neuroanatomy, 12, (2018).

10.3389/fnana.2018.00048

382

Adaptive wavefront shaping for controlling nonlinear multimode interactions in optical fibres

O. Tzang, A. M. Caravaca-Aguirre, K. Wagner, R. Piestun, Nature Photonics, 12, 368–374, (2018).

10.1038/s41566-018-0167-7

383

Understanding Chemical Bonding in Alloys and the Representation in Atomistic Simulations

J. Liu, E. Tennessen, J. Miao, Y. Huang, J. M. Rondinelli, H. Heinz, The Journal of Physical Chemistry C, 122, 14996-15009, (2018).

10.1021/acs.jpcc.8b01891

384

Single-shot 3D coherent diffractive imaging of core-shell nanoparticles with elemental specificity

A. Pryor, A. Rana, R. Xu, J. A. Rodriguez, Y. Yang, M. Gallagher-Jones, H. Jiang, K. Kanhaiya, M. Nathanson, J. Park, S. Kim, S. Kim, D. Nam, Y. Yue, J. Fan, Z. Sun, B. Zhang, D. F. Gardner, C. Dias, Y. Joti, T. Hatsui, T. Kameshima, Y. Inubushi, K. Tono, J. Lee, M. Yabashi, C. Song, T. Ishikawa, H. C. Kapteyn, M. M. Murnane, H. Heinz, J. Miao, Scientific Reports, 8, 8284, (2018).

10.1038/s41598-018-26182-1

385

Structure of Telomerase with Telomeric DNA

J. Jiang, Y. Wang, L. Sušac, H. Chan, R. Basu, Z. Hong Zhou, J. Feigon, Cell, 173, 1179-1190.e13, (2018).

10.1016/j.cell.2018.04.038

386

Far Infrared Synchrotron Near-Field Nanoimaging and Nanospectroscopy

O. Khatib, H. A. Bechtel, M. C. Martin, M. B. Raschke, G. ce Carr, ACS Photonics, 5, 2773-2779, (2018).

10.1021/acsphotonics.8b00565

387

In situ coherent diffractive imaging

Y. Lo, L. Zhao, M. Gallagher-Jones, A. Rana, J. J. Lodico, W. Xiao, B. C. Regan, J. Miao, Nature Communications, 9, (2018).

10.1038/s41467-018-04259-9

388

Analysis of Global and Site-Specific Radiation Damage in Cryo-EM

J. Hattne, D. Shi, C. Glynn, C. Zee, M. Gallagher-Jones, M. W. Martynowycz, J. A. Rodriguez, T. Gonen, Structure, 26, 759-766.e4, (2018).

10.1016/j.str.2018.03.021

389

Students’ flexible use of ontologies and the value of tentative reasoning: Examples of conceptual understanding in three canonical topics of quantum mechanics

J. R. Hoehn, N. D. Finkelstein, Physical Review Physics Education Research, 14, 010122, (2018).

10.1103/physrevphyseducres.14.010122

390

Structure of the herpes simplex virus 1 capsid with associated tegument protein complexes

X. Dai, Z. Hong Zhou, Science, 360, eaao7298, (2018).

10.1126/science.aao7298

391

Atomic Structure of the E2 Inner Core of Human Pyruvate Dehydrogenase Complex

J. Jiang, F. L. Baiesc, Y. Hiromasa, X. Yu, W. Hui, X. Dai, T. E. Roche, Z. Hong Zhou, Biochemistry, 57, 2325-2334, (2018).

10.1021/acs.biochem.8b00357

392

Spectrally Resolved and Functional Super-resolution Microscopy via Ultrahigh-Throughput Single-Molecule Spectroscopy

R. Yan, S. Moon, S. J. Kenny, K. Xu, Accounts of Chemical Research, 51, 697-705, (2018).

10.1021/acs.accounts.7b00545

393

Long-Lived Correlated Triplet Pairs in a π-Stacked Crystalline Pentacene Derivative

B. D. Folie, J. B. Haber, S. Refaely-Abramson, J. B. Neaton, N. S. Ginsberg, Journal of the American Chemical Society, 140, 2326-2335, (2018).

10.1021/jacs.7b12662

394

Intercalation events visualized in single microcrystals of graphite

E. R. White, J. J. Lodico, B. C. Regan, Nature Communications, 1969, (2017).

10.1038/s41467-017-01787-8

395

Sub-ångström cryo-EM structure of a prion protofibril reveals a polar clasp

M. Gallagher-Jones, C. Glynn, D. R. Boyer, M. W. Martynowycz, E. Hernandez, J. Miao, C. Zee, I. V. Novikova, L. Goldschmidt, H. T. McFarlane, G. F. Helguera, J. E. Evans, M. R. Sawaya, D. Cascio, D. S. Eisenberg, T. Gonen, J. A. Rodriguez, Nature Structural & Molecular Biology, 25, 131-134, (2018).

10.1038/s41594-017-0018-0

396

Membrane insertion of—and membrane potential sensing by—semiconductor voltage nanosensors: Feasibility demonstration

K. Park, Y. Kuo, V. Shvadchak, A. Ingargiola, X. Dai, L. Hsiung, W. Kim, H. Zhou, P. Zou, A. J. Levine, J. Li, S. Weiss, Science Advances, 4, e1601453, (2018).

10.1126/sciadv.1601453

397

Nanoimaging of Electronic Heterogeneity in Bi2Se3 and Sb2Te3 Nanocrystals

X. Lu, O. Khatib, X. Du, J. Duan, W. Wei, X. Liu, H. A. Bechtel, F. D'Apuzzo, M. Yan, A. Buyanin, Q. Fu, J. Chen, M. Salmeron, J. Zeng, M. B. Raschke, P. Jiang, X. Bao, Advanced Electronic Materials, 4, 1700377, (2017).

10.1002/aelm.201700377

398

Thermometry of Silicon Nanoparticles

M. Mecklenburg, B. Zutter, B. C. Regan, Physical Review Applied, 9, 014005, (2018).

10.1103/physrevapplied.9.014005

399

Structure and mutagenesis reveal essential capsid protein interactions for KSHV replication

X. Dai, D. Gong, H. Lim, J. Jih, T. Wu, R. Sun, Z. Hong Zhou, Nature, 553, 521-525, (2018).

10.1038/nature25438

400

Multiple beam ptychography for large field-of-view, high throughput, quantitative phase contrast imaging

C. Bevis, R. Karl, J. Reichanadter, D. F. Gardner, C. Porter, E. Shanblatt, M. Tanksalvala, G. F. Mancini, H. Kapteyn, M. Murnane, D. Adams, Ultramicroscopy, 184, 164-171, (2018).

10.1016/j.ultramic.2017.08.018