Publications

451

Students’ flexible use of ontologies and the value of tentative reasoning: Examples of conceptual understanding in three canonical topics of quantum mechanics

J. R. Hoehn, N. D. Finkelstein, Physical Review Physics Education Research, 14, 010122, (2018).

10.1103/physrevphyseducres.14.010122

452

Structure of the herpes simplex virus 1 capsid with associated tegument protein complexes

X. Dai, Z. Hong Zhou, Science, 360, eaao7298, (2018).

10.1126/science.aao7298

453

Atomic Structure of the E2 Inner Core of Human Pyruvate Dehydrogenase Complex

J. Jiang, F. L. Baiesc, Y. Hiromasa, X. Yu, W. Hui, X. Dai, T. E. Roche, Z. Hong Zhou, Biochemistry, 57, 2325-2334, (2018).

10.1021/acs.biochem.8b00357

454

Sub-wavelength Resolution, Wide Field-Of-View, and Quantitative 13nm Imaging in Reflection and Transmission with a Tabletop High Harmonic Source

C. Porter, M. Tanksalvala, D. Gardner, G. Mancini, M. Gerrity, G. Miley, X. Zhang, N. Horiguchi, E. Shanblatt, B. Galloway, Y. Esashi, C. Bevis, R. Karl, P. Johnson, D. Adams, H. Kapteyn, M. Murnane, High-Brightness Sources and Light-driven Interactions, (2018).

10.1364/euvxray.2018.et2b.2

455

Characterization and imaging of nanostructured materials using tabletop extreme ultraviolet light sources

R. Karl, G. F. Mancini, J. Knobloch, T. Frazer, J. N. Hernandez-Charpak, B. Abad Mayor, M. Tanksalvala, C. L. Porter, C. S. Bevis, W. Chao, D. E. Adams, H. C. Kapteyn, M. Murnane, Metrology, Inspection, and Process Control for Microlithography XXXII, (2018).

10.1117/12.2297223

456

Complex EUV imaging reflectometry: spatially resolved 3D composition determination and dopant profiling with a tabletop 13nm source

R. Karl, P. Johnsen, D. E. Adams, H. C. Kapteyn, M. M. Murnane, N. Horiguchi, C. L. Porter, M. Tanksalvala, M. Gerrity, G. P. Miley, X. Zhang, C. S. Bevis, Y. Esashi, Metrology, Inspection, and Process Control for Microlithography XXXII, (2018).

10.1117/12.2297464

457

Multi-model imaging of the interaction of nanomaterials with cells

J. Miao, IUCrJ, 5, 122-123, (2018).

10.1107/s2052252518003548

458

Multiphoton microscopy of ECM proteins in baboon aortic leaflet

M. Gonzalez, I. Saytashev, B. Gonzalez, A. Pinero, M. Perez, S. Ramaswamy, J. C. Ramella-Roman, C. Luna, Diagnostic and Therapeutic Applications of Light in Cardiology 2018, (2018).

10.1117/12.2291024

459

Spectrally Resolved and Functional Super-resolution Microscopy via Ultrahigh-Throughput Single-Molecule Spectroscopy

R. Yan, S. Moon, S. J. Kenny, K. Xu, Accounts of Chemical Research, 51, 697-705, (2018).

10.1021/acs.accounts.7b00545

460

Long-Lived Correlated Triplet Pairs in a π-Stacked Crystalline Pentacene Derivative

B. D. Folie, J. B. Haber, S. Refaely-Abramson, J. B. Neaton, N. S. Ginsberg, Journal of the American Chemical Society, 140, 2326-2335, (2018).

10.1021/jacs.7b12662

461

Sub-ångström cryo-EM structure of a prion protofibril reveals a polar clasp

M. Gallagher-Jones, C. Glynn, D. R. Boyer, M. W. Martynowycz, E. Hernandez, J. Miao, C. Zee, I. V. Novikova, L. Goldschmidt, H. T. McFarlane, G. F. Helguera, J. E. Evans, M. R. Sawaya, D. Cascio, D. S. Eisenberg, T. Gonen, J. A. Rodriguez, Nature Structural & Molecular Biology, 25, 131-134, (2018).

10.1038/s41594-017-0018-0

462

Intercalation events visualized in single microcrystals of graphite

E. R. White, J. J. Lodico, B. C. Regan, Nature Communications, 1969, (2017).

10.1038/s41467-017-01787-8

463

Membrane insertion of—and membrane potential sensing by—semiconductor voltage nanosensors: Feasibility demonstration

K. Park, Y. Kuo, V. Shvadchak, A. Ingargiola, X. Dai, L. Hsiung, W. Kim, H. Zhou, P. Zou, A. J. Levine, J. Li, S. Weiss, Science Advances, 4, e1601453, (2018).

10.1126/sciadv.1601453

464

Nanoimaging of Electronic Heterogeneity in Bi2Se3 and Sb2Te3 Nanocrystals

X. Lu, O. Khatib, X. Du, J. Duan, W. Wei, X. Liu, H. A. Bechtel, F. D'Apuzzo, M. Yan, A. Buyanin, Q. Fu, J. Chen, M. Salmeron, J. Zeng, M. B. Raschke, P. Jiang, X. Bao, Advanced Electronic Materials, 4, 1700377, (2017).

10.1002/aelm.201700377

465

Thermometry of Silicon Nanoparticles

M. Mecklenburg, B. Zutter, B. C. Regan, Physical Review Applied, 9, 014005, (2018).

10.1103/physrevapplied.9.014005

466

Structure and mutagenesis reveal essential capsid protein interactions for KSHV replication

X. Dai, D. Gong, H. Lim, J. Jih, T. Wu, R. Sun, Z. Hong Zhou, Nature, 553, 521-525, (2018).

10.1038/nature25438

467

Multiple beam ptychography for large field-of-view, high throughput, quantitative phase contrast imaging

C. Bevis, R. Karl, J. Reichanadter, D. F. Gardner, C. Porter, E. Shanblatt, M. Tanksalvala, G. F. Mancini, H. Kapteyn, M. Murnane, D. Adams, Ultramicroscopy, 184, 164-171, (2018).

10.1016/j.ultramic.2017.08.018

468

Secondary Electron Contrast in STEM Electron Beam-Induced Current (EBIC): a Path Towards Mapping Electronic Structure

W. A. Hubbard, M. Mecklenburg, H. Chan, B. C. Regan, Microscopy and Microanalysis, 24, 1846-1847, (2018).

10.1017/s1431927618009716

469

General-purpose, wide field-of-view reflection imaging with a tabletop 13 nm light source

C. L. Porter, M. Tanksalvala, M. Gerrity, G. Miley, X. Zhang, C. Bevis, E. Shanblatt, R. Karl, M. M. Murnane, D. E. Adams, H. C. Kapteyn, Optica, 4, 1552-1557, (2017).

10.1364/optica.4.001552

470

Structure of the yeast spliceosomal postcatalytic P complex

S. Liu, X. Li, L. Zhang, J. Jiang, R. C. Hill, Y. Cui, K. C. Hansen, Z. Hong Zhou, R. Zhao, Science, 358, 1278-1283, (2017).

10.1126/science.aar3462

471

Catastrophic disassembly of actin filaments via Mical-mediated oxidation

E. E. Grintsevich, P. Ge, M. R. Sawaya, H. Yesilyurt, J. R. Terman, Z. Hong Zhou, E. Reisler, Nature Communications, 8, (2017).

10.1038/s41467-017-02357-8

472

3D image scanning microscopy with engineered excitation and detection

C. Roider, R. Piestun, A. Jesacher, Optica, 4, 1373, (2017).

10.1364/optica.4.001373

473

A streaming multi-GPU implementation of image simulation algorithms for scanning transmission electron microscopy

A. Pryor, C. Ophus, J. Miao, Advanced Structural and Chemical Imaging, 3, 15, (2017).

10.1186/s40679-017-0048-z

474

Low Dimensional Manifold Model for Image Processing

S. Osher, Z. Shi, W. Zhu, SIAM Journal on Imaging Sciences, 10, 1669-1690, (2017).

10.1137/16m1058686

475

Conformation-Directed Formation of Self-Healing Diblock Copolypeptide Hydrogels via Polyion Complexation

Y. Sun, A. L. Wollenberg, T. O’Shea, Y. Cui, Z. Hong Zhou, M. V. Sofroniew, T. J. Deming, Journal of the American Chemical Society, 139, 15114-15121, (2017).

10.1021/jacs.7b08190

476

Noninvasive Cathodoluminescence-Activated Nanoimaging of Dynamic Processes in Liquids

C. G. Bischak, R. B. Wai, C. Cherqui, J. A. Busche, S. C. Quillin, C. L. Hetherington, Z. Wang, C. D. Aiello, D. G. Schlom, S. Aloni, D. nk Ogletree, D. J. Masiello, N. S. Ginsberg, ACS Nano, 11, 10583-10590, (2017).

10.1021/acsnano.7b06081

477

Resolving ultrafast exciton migration in organic solids at the nanoscale

S. B. Penwell, L. S. Ginsberg, R. Noriega, N. S. Ginsberg, Nature Materials, 16, 1136-1141, (2017).

10.1038/nmat4975

478

First Demonstration of Sub-Wavelength Imaging at Short Wavelengths

D. F. Gardner, E. R. Shanblatt, M. Tanksalvala, X. Zhang, B. R. Galloway, C. L. Porter, R. Karl, C. Bevis, B. Zhang, M. D. Seaberg, G. F. Mancini, D. E. Adams, H. C. Kapteyn, M. M. Murnane, Frontiers in Optics 2017, (2017).

10.1364/ls.2017.lm3f.4

479

Plasmon Energy Mapping in Aluminum and Indium with Sub-Nanometer Resolution

B. Zutter, M. Mecklenburg, B. C. Regan, Microscopy and Microanalysis, 2372, 378-379, (2017).

10.1017/s1431927617002574

480

Temperature-dependent signals in STEM Electron Beam-Induced Current (EBIC) Imaging

W. A. Hubbard, E. R. White, M. Mecklenburg, B. C. Regan, Microscopy and Microanalysis, 23, 1506-1507, (2017).

10.1017/s1431927617008194

481

Detailed In Situ Observations of Electromigration in Aluminum Wires

M. Mecklenburg, B. Zutter, W. A. Hubbard, S. Aloni, B. C. Regan, Microscopy and Microanalysis, 23, 1450-1451, (2017).

10.1017/s1431927617007917

482

3D Imaging of Nanoalloy Catalysts at Atomic Resolution

J. Zhou, Y. Yang, Z. Zhao, C. Ophus, P. Ercius, Y. Huang, J. Miao, Microscopy and Microanalysis, 23, 2032-2033, (2017).

10.1017/s1431927617010820

483

STEM EBIC Mapping of the Metal-Insulator Transition in Thin-film NbO2

W. A. Hubbard, T. Joshi, M. Mecklenburg, B. Zutter, P. Borisov, D. Lederman, B. C. Regan, Microscopy and Microanalysis, 23, 1428-1429, (2017).

10.1017/s1431927617007802

484

In Situ Optical Microscopy of the Electrochemical Intercalation of Lithium into Single Crystal Graphite

J. J. Lodico, M. Woodall, H. Chan, W. A. Hubbard, B. C. Regan, Microscopy and Microanalysis, 23, 1982-1983, (2017).

10.1017/s1431927617010571

485

In Situ Observation of Cooling in a Bismuth Telluride and Bismuth-Antimony Telluride Nanoscale Heterojunction

G. Bal, M. Mecklenburg, W. A. Hubbard, B. Vareskic, B. Zutter, S. Aloni, B. C. Regan, Microscopy and Microanalysis, 23, 1996-1997, (2017).

10.1017/s1431927617010649

486

Atomic structure of the human cytomegalovirus capsid with its securing tegument layer of pp150

X. Yu, J. Jih, J. Jiang, Z. Hong Zhou, Science, 356, eaam6892, (2017).

10.1126/science.aam6892

487

Extremely Wide Field of View Tabletop Ptychographic Imaging with 12.7 nm Illumination

C. L. Porter, M. Tanksalvala, M. Gerrity, G. P. Miley, X. Zhang, C. S. Bevis, E. R. Shanblatt, R. Karl, G. F. Mancini, D. A. Adams, H. C. Kapteyn, M. M. Murnane, Imaging and Applied Optics 2017 (3D, AIO, COSI, IS, MATH, pcAOP), (2017).

10.1364/cosi.2017.cw2b.4

488

Stroboscopic Imaging of Acoustic Waves in Nanostructures using Tabletop High Harmonics

R. Karl, G. Mancini, D. Gardner, J. Knobloch, T. Frazer, J. N. Hernandez-Charpak, B. Mayor, E. Shanblatt, M. Tanksalvala, C. Porter, C. Bevis, D. Adams, H. Kapteyn, M. M. Murnane, Imaging and Applied Optics 2017 (3D, AIO, COSI, IS, MATH, pcAOP), (2017).

10.1364/cosi.2017.cw1b.2

489

Sub-wavelength 12.6nm Resolution Using a Tabletop High Harmonic Coherent Diffractive Microscope

C. Bevis, D. F. Gardner, M. Tanksalvala, E. R. Shanblatt, X. Zhang, B. R. Galloway, C. R. Porter, R. Karl, G. F. Mancini, D. E. Adams, H. Kapteyn, M. M. Murnane, Imaging and Applied Optics 2017 (3D, AIO, COSI, IS, MATH, pcAOP), (2017).

10.1364/cosi.2017.cw2b.3

490

Reliable computational design of biological-inorganic materials to the large nanometer scale using Interface-FF

C. C. Dharmawardhana, K. Kanhaiya, T. Lin, A. Garley, M. R. Knecht, J. Zhou, J. Miao, H. Heinz, Molecular Simulation, 43, 1394-1405, (2017).

10.1080/08927022.2017.1332414

491

Correlative cellular ptychography with functionalized nanoparticles at the Fe L-edge

M. Gallagher-Jones, C. Dias, A. Pryor, K. Bouchmella, L. Zhao, Y. Lo, M. Cardoso, D. Shapiro, J. Rodriguez, J. Miao, Scientific Reports, 4757, (2017).

10.1038/s41598-017-04784-5

492

Imaging the spatial modulation of a relativistic electron beam

C. Zhang, D. Cesar, W. Graves, C. Limborg, L. Malin, J. Maxson, P. Musumeci, E. Nanni, J. Spence, A. Urbanowicz, Proceedings of the 8th Int. Particle Accelerator Conf., Denmark, (2017).

10.18429/JACOW-IPAC2017-MOPAB150

493

Enhanced information content for three-dimensional localization and tracking using the double-helix point spread function with variable-angle illumination epifluorescence microscopy

D. Wang, A. Agrawal, R. Piestun, D. K. Schwartz, Applied Physics Letters, 110, 211107, (2017).

10.1063/1.4984133

494

Full-Field Functional Imaging of Nanoscale Dynamics Using Tabletop High Harmonics

R. M. Karl, G. F. Mancini, D. Gardner, E. Shanblatt, J. Knobloch, T. Frazer, J. Hernandez-Charpak, B. Abad Mayor, M. Tanksalvala, C. Porter, C. Bevis, D. Adams, H. Kapteyn, M. Murnane, Conference on Lasers and Electro-Optics, (2017).

10.1364/cleo_at.2017.jth5c.8

495

GENFIRE: A generalized Fourier iterative reconstruction algorithm for high-resolution 3D imaging

A. Pryor, Y. Yang, A. Rana, M. Gallagher-Jones, J. Zhou, Y. Lo, G. Melinte, W. Chiu, J. A. Rodriguez, J. Miao, Scientific Reports, 7, 10409 , (2017).

10.1038/s41598-017-09847-1

496

Sub-wavelength coherent imaging of periodic samples using a 13.5 nm tabletop high harmonic light source

D. F. Gardner, M. Tanksalvala, E. R. Shanblatt, X. Zhang, B. R. Galloway, C. L. Porter, R. Karl Jr, C. Bevis, D. E. Adams, H. C. Kapteyn, M. M. Murnane, G. F. Mancini, Nature Photonics, 11, 259-263, (2017).

10.1038/nphoton.2017.33

497

Deciphering chemical order/disorder and material properties at the single-atom level

Y. Yang, C. Chen, M. C. Scott, C. Ophus, R. Xu, A. Pryor, L. Wu, F. Sun, W. Theis, J. Zhou, M. Eisenbach, P. C. Kent, R. F. Sabirianov, H. Zeng, P. Ercius, J. Miao, Nature, 542, 75-79, (2017).

10.1038/nature21042

498

Double-shot MeV electron diffraction and microscopy

P. P. Musumeci, D. D. Cesar, J. J. Maxson, Structural Dynamics, 4, 044025, (2017).

10.1063/1.4983390

499

Corrigendum: CryoEM structure of the Methanospirillum hungatei archaellum reveals structural features distinct from the bacterial flagellum and type IV pilus

N. Poweleit, P. Ge, H. H. Nguyen, R. R. Ogorzalek Loo, R. P. Gunsalus, Z. Hong Zhou, Nature Microbiology, 2, 16264, (2016).

10.1038/nmicrobiol.2016.264

500

In situ structures of the genome and genome-delivery apparatus in a single-stranded RNA virus

X. Dai, Z. Li, M. Lai, S. Shu, Y. Du, Z. Hong Zhou, R. Sun, Nature, 541, 112-116, (2016).

10.1038/nature20589

STROBE Publications

2018