STROBE Publications

Showing publications 101 – 150 of 458

2022

101

Structural basis of RNA conformational switching in the transcriptional regulator 7SK RNP

Y. Yang, S. Liu, S. Egloff, C. D. Eichhorn, T. Hadjian, J. Zhen, T. Kiss, Z. ng Zhou, J. Feigon, Molecular Cell, 82, 1724-1736.e7, (2022).

10.1016/j.molcel.2022.03.001

102

Locations and in situ structure of the polymerase complex inside the virion of vesicular stomatitis virus

Z. Si, K. Zhou, J. Tsao, M. Luo, Z. ng Zhou, Proceedings of the National Academy of Sciences, 119, e2111948119, (2022).

10.1073/pnas.2111948119

103

Impacts on student learning, confidence, and affect in a remote, large-enrollment, course-based undergraduate research experience in physics

A. Werth, C. G. West, H. J. Lewandowski, Physical Review Physics Education Research, 18, 010129, (2022).

10.1103/physrevphyseducres.18.010129

104

Structure of active human telomerase with telomere shelterin protein TPP1

B. Liu, Y. He, Y. Wang, H. Song, Z. ng Zhou, J. Feigon, Nature, 604, 578-583, (2022).

10.1038/s41586-022-04582-8

105

Untangling the Mechanisms of Lattice Distortions in Biogenic Crystals across Scales

V. Schoeppler, P. K. Cook, C. Detlefs, R. Demichelis, I. Zlotnikov, Advanced Materials, 34, 2200690, (2022).

10.1002/adma.202200690

106

High-entropy nanoparticles: Synthesis-structure-property relationships and data-driven discovery

Y. Yao, Q. Dong, A. Brozena, J. Luo, J. Miao, M. Chi, C. Wang, I. G. Kevrekidis, Z. Ren, J. Greeley, G. Wang, A. Anapolsky, L. Hu, Science, 376, 6589, (2022).

10.1126/science.abn3103

107

Real-time reconstruction of high energy, ultrafast laser pulses using deep learning

M. Stanfield, J. Ott, C. Gardner, N. F. Beier, D. M. Farinella, C. A. Mancuso, P. Baldi, F. Dollar, Scientific Reports, 12, 5299, (2022).

10.1038/s41598-022-09041-y

108

Self-calibrated 3D differential phase contrast microscopy with optimized illumination

R. Cao, M. Kellman, D. Ren, R. Eckert, L. Waller, Biomedical Optics Express, 13, 1671, (2022).

10.1364/boe.450838

109

Dynamic, Spontaneous Blistering of Substrate-Supported Graphene in Acidic Solutions

Y. Li, B. Wang, W. Li, K. Xu, ACS Nano, (2022).

10.1021/acsnano.1c11616

110

Direct observation of topological magnetic monopoles using soft x-ray vector ptychography at 10 nm resolution

C. Liao, A. Rana, E. Iacocca, J. Zou, M. Pham, X. Lu, E. Subramanian, Y. Lo, S. A. Ryan, C. S. Bevis, R. M. Karl, A. J. Glaid, J. Rable, P. Mahale, J. Hirst, T. Ostler, W. Liu, C. M. O'Leary, Y. Yu, K. Bustillo, H. Ohldag, D. A. Shapiro, S. Yazdi, T. E. Mallouk, S. J. Osher, H. C. Kapteyn, V. H. Crespi, J. V. Badding, Y. Tserkovnyak, J. Miao, M. M. Murnane, Optica High-brightness Sources and Light-driven Interactions Congress 2022, JTh6A.3, (2022).

10.1364/euvxray.2022.jth6a.3

111

Cryogenic 4D-STEM analysis of an amorphous-crystalline polymer blend: Combined nanocrystalline and amorphous phase mapping

J. Donohue, S. E. Zeltmann, K. C. Bustillo, B. Savitzky, M. Jones, G. F. Meyers, C. Ophus, A. M. Minor, iScience, 25, 103882, (2022).

10.1016/j.isci.2022.103882

112

Membrane potential sensing: Material design and method development for single particle optical electrophysiology

D. Roy, Z. Shapira, S. Weiss, The Journal of Chemical Physics, 156, 084201, (2022).

10.1063/5.0076522

113

Ultrafast infrared nano-imaging of far-from-equilibrium carrier and vibrational dynamics

J. Nishida, S. C. Johnson, P. S. Chang, D. M. Wharton, S. A. Dönges, O. Khatib, M. B. Raschke, Nature Communications, 13, 1083, (2022).

10.1038/s41467-022-28224-9

114

Automated Crystal Orientation Mapping in py4DSTEM using Sparse Correlation Matching

C. Ophus, S. E. Zeltmann, A. Bruefach, A. Rakowski, B. H. Savitzky, A. M. Minor, M. C. Scott, Microscopy and Microanalysis, 1-14, (2022).

10.1017/s1431927622000101

115

Hot-Band Absorption Can Mimic Entangled Two-Photon Absorption

A. Mikhaylov, R. N. Wilson, K. M. Parzuchowski, M. D. Mazurek, C. H. Camp, M. J. Stevens, R. Jimenez, The Journal of Physical Chemistry Letters, 13, 1489-1493, (2022).

10.1021/acs.jpclett.1c03751

116

Multiple conformations of trimeric spikes visualized on a non-enveloped virus

Y. Zhang, Y. Cui, J. Sun, Z. ng Zhou, Nature Communications, 13, (2022).

10.1038/s41467-022-28114-0

2021

117

Elucidating the local atomic and electronic structure of amorphous oxidized superconducting niobium films

T. F. Harrelson, E. Sheridan, E. Kennedy, J. Vinson, A. T. N'Diaye, M. P. Altoé, A. Schwartzberg, I. Siddiqi, D. nk Ogletree, M. C. Scott, S. M. Griffin, Applied Physics Letters, 119, 244004, (2021).

10.1063/5.0069549

118

Visualizing the Electron Wind Force in the Elastic Regime

M. Mecklenburg, B. T. Zutter, X. Ling, W. A. Hubbard, B. C. Regan, Nano Letters, 21, 10172-10177, (2021).

10.1021/acs.nanolett.1c02641

119

The epitope arrangement on flavivirus particles contributes to Mab C10’s extraordinary neutralization breadth across Zika and dengue viruses

A. Sharma, X. Zhang, W. Dejnirattisai, X. Dai, D. Gong, W. Wongwiwat, S. Duquerroy, A. Rouvinski, M. Vaney, P. Guardado-Calvo, A. Haouz, P. England, R. Sun, Z. ng Zhou, J. Mongkolsapaya, G. R. Screaton, F. A. Rey, Cell, 184, 6052-6066.e18, (2021).

10.1016/j.cell.2021.11.010

120

Prismatic 2.0-Simulation software for scanning and high resolution transmission electron microscopy (STEM and HRTEM)

L. Rangel DaCosta, H. G. Brown, P. M. Pelz, A. Rakowski, N. Barber, P. O’Donovan, P. McBean, L. Jones, J. Ciston, M. C. Scott, C. Ophus, Micron, 151, 103141, (2021).

10.1016/j.micron.2021.103141

121

Simultaneous Successive Twinning Captured by Atomic Electron Tomography

P. M. Pelz, C. Groschner, A. Bruefach, A. Satariano, C. Ophus, M. C. Scott, ACS Nano, 16, 588-596, (2021).

10.1021/acsnano.1c07772

122

Bluetongue virus capsid protein VP5 perforates membranes at low endosomal pH during viral entry

X. Xia, W. Wu, Y. Cui, P. Roy, Z. ng Zhou, Nature Microbiology, 6, 1424-1432, (2021).

10.1038/s41564-021-00988-8

123

Mapping Charge Recombination and the Effect of Point-Defect Insertion in GaAs Nanowire Heterojunctions

B. T. Zutter, H. Kim, W. A. Hubbard, D. Ren, M. Mecklenburg, D. Huffaker, B. C. Regan, Physical Review Applied, 16, 044030 , (2021).

10.1103/physrevapplied.16.044030

124

Three-dimensional atomic packing in amorphous solids with liquid-like structure

Y. Yuan, D. S. Kim, J. Zhou, D. J. Chang, F. Zhu, Y. Nagaoka, Y. Yang, M. Pham, S. J. Osher, O. Chen, P. Ercius, A. K. Schmid, J. Miao, Nature Materials, 21, 95–102, (2021).

10.1038/s41563-021-01114-z

125

Directional thermal channeling: A phenomenon triggered by tight packing of heat sources

H. Honarvar, J. L. Knobloch, T. D. Frazer, B. Abad, B. McBennett, M. I. Hussein, H. C. Kapteyn, M. M. Murnane, J. N. Hernandez-Charpak, Proceedings of the National Academy of Sciences, 118, e2109056118, (2021).

10.1073/pnas.2109056118

126

Imaging Dielectric Breakdown in Valence Change Memory

W. A. Hubbard, J. J. Lodico, H. Chan, M. Mecklenburg, B. C. Regan, Advanced Functional Materials, 2102313, (2021).

10.1002/adfm.202102313

127

Cryo-EM structure of the sodium-driven chloride/bicarbonate exchanger NDCBE

W. Wang, K. Tsirulnikov, H. Zhekova, G. Kayik, H. Khan, R. Azimov, N. Abuladze, L. Kao, D. Newman, S. Yu Noskov, Z. Hong Zhou, A. Pushkin, I. Kurtz, Nature Communications, 12, (2021).

10.1038/s41467-021-25998-2

128

Structure of human cytomegalovirus virion reveals host tRNA binding to capsid-associated tegument protein pp150

Y. Liu, D. Strugatsky, W. Liu, Z. Hong Zhou, Nature Communication, 12, (2021).

10.1038/s41467-021-25791-1

129

Capturing 3D atomic defects and phonon localization at the 2D heterostructure interface

X. Tian, X. Yan, G. Varnavides, Y. Yuan, D. S. Kim, C. J. Ciccarino, P. Anikeeva, M. Li, L. Li, P. Narang, X. Pan, J. Miao, Science Advances, 7, eabi6699, (2021).

10.1126/sciadv.abi6699

130

4D Beam Tomography at the UCLA Pegasus Laboratory

V. Guo, P. Denham, P. Musumeci, A. Ody, Y. Park, Proceedings of the 10th International Beam Instrumentation Conference, Rep. of Korea, (2021).

10.18429/JACOW-IBIC2021-TUPP15

131

Antibody-Based Inhibition of Pathogenic New World Hemorrhagic Fever Mammarenaviruses by Steric Occlusion of the Human Transferrin Receptor 1 Apical Domain

S. Ferrero, M. D. Flores, C. Short, C. A. Vazquez, L. E. Clark, J. Ziegenbein, S. Zink, D. Fuentes, C. Payes, M. V. Batto, M. Collazo, C. C. García, J. Abraham, S. M. Cordo, J. A. Rodriguez, G. Helguera, Journal of Virology, 95, e01868-20, (2021).

10.1128/jvi.01868-20

132

Soft x-ray linear dichroic ptychography: the study of crystal orientation in biominerals

V. J. Schoeppler, M. A. Marcus, Y. Yu, R. S. Celestre, K. C. Bustillo, R. W. Falcone, D. A. Shapiro, X-Ray Nanoimaging: Instruments and Methods V, Proc. SPIE 11839, 118390D, (2021).

10.1117/12.2594172

133

Native structure of the RhopH complex, a key determinant of malaria parasite nutrient acquisition

C. Ho, J. Jih, M. Lai, X. Li, D. E. Goldberg, J. Beck, Z. Hong Zhou, Proceedings of the National Academy of Sciences, 118, e2100514118, (2021).

10.1073/pnas.2100514118

134

Technique and Computational Improvements in 4D STEM and Cross-Correlation Analysis

T. O'Neill, B. C. Regan, M. Mecklenburg, Microscopy and Microanalysis, 27, 1540-1541, (2021).

10.1017/s1431927621005687

135

Mean Angular Deviation Minimization To Determine Lattice Parameters in Transmission Kikuchi Diffraction

X. Ling, J. Lodico, B. C. Regan, M. Mecklenburg, Microscopy and Microanalysis, 27, 1608-1609, (2021).

10.1017/s1431927621005912

136

In Situ STEM Observations of Elemental Segregation in Phase Change Material GST Under Electrical and Thermal Stress

H. Chan, M. Mecklenburg, W. Hubbard, J. Lodico, B. Zutter, B. C. Regan, Microscopy and Microanalysis, 27, 168-169, (2021).

10.1017/s1431927621001203

137

Imaging Soft and Hard Dielectric Breakdown in Resistive Switching

B. C. Regan, J. Lodico, H. Chan, M. Mecklenburg, W. Hubbard, Microscopy and Microanalysis, 27, 2354-2355, (2021).

10.1017/s1431927621008461

138

Modern STEM EBIC: Emerging Modes and Methods

W. Hubbard, M. Mecklenburg, J. Lodico, B. Zutter, H. Chan, B. C. Regan, Microscopy and Microanalysis, 27, 2350-2352, (2021).

10.1017/s143192762100845x

139

Visualizing the Electron Wind Force in the Elastic Regime

M. Mecklenburg, B. Zutter, W. A. Hubbard, X. Ling, B. C. Regan, Microscopy and Microanalysis, 27, 106-107, (2021).

10.1017/s1431927621001008

140

Identification and architecture of a putative secretion tube across mycobacterial outer envelope

X. Cai, L. Liu, C. Qiu, C. Wen, Y. He, Y. Cui, S. Li, X. Zhang, L. Zhang, C. Tian, L. Bi, Z. Zhou, W. Gong, Science Advances, 7, eabg5656, (2021).

10.1126/sciadv.abg5656

141

Introduction of a 3 × 4 Mueller matrix decomposition method

M. Gonzalez, R. Ossikovski, T. Novikova, J. Ramella-Roman, Journal of Physics D: Applied Physics, 54, 424005, (2021).

10.1088/1361-6463/ac1622

142

Mueller matrix imaging for collagen scoring in mice model of pregnancy

H. Lee, I. Saytashev, V. Du Le, M. Mahendroo, J. Ramella-Roman, T. Novikova, Scientific Reports, 11, 15621, (2021).

10.1038/s41598-021-95020-8

143

Crystallization by Amorphous Particle Attachment: On the Evolution of Texture

V. Schoeppler, D. Stier, R. J. Best, C. Song, J. Turner, B. H. Savitzky, C. Ophus, M. A. Marcus, S. Zhao, K. Bustillo, I. Zlotnikov, Advanced Materials, 2101358, (2021).

10.1002/adma.202101358

144

A General and Predictive Understanding of Thermal Transport from 1D- and 2D-Confined Nanostructures: Theory and Experiment

A. Beardo, J. L. Knobloch, L. Sendra, J. Bafaluy, T. D. Frazer, W. Chao, J. N. Hernandez-Charpak, H. C. Kapteyn, B. Abad, M. M. Murnane, F. er Alvarez, J. Camacho, ACS Nano, 15, 13019-13030, (2021).

10.1021/acsnano.1c01946

145

Scattering Matrix Determination in Crystalline Materials from 4D Scanning Transmission Electron Microscopy at a Single Defocus Value

S. D. Findlay, H. G. Brown, P. M. Pelz, C. Ophus, J. Ciston, L. J. Allen, Microscopy and Microanalysis, 27, 744-757, (2021).

10.1017/s1431927621000490

146

Multidimensional Nano-Imaging of Structure, Coupling, and Disorder in Molecular Materials

S. A. Dönges, R. Peyton Cline, S. E. Zeltmann, J. Nishida, B. Metzger, A. M. Minor, J. Eaves, M. B. Raschke, Nano Letters, 21, 6463-6470, (2021).

10.1021/acs.nanolett.1c01369

147

Stratified Diffractive Optical Elements for Azimuthal Multiplexing

H. Wang, R. Piestun, OSA Imaging and Applied Optics Congress 2021 (3D, COSI, DH, ISA, pcAOP), (2021).

10.1364/dh.2021.dth7c.6

148

Maximizing the Field of View in Blind Ptychography

N. W. Jenkins, M. Tanksalvala, Y. Esashi, Z. Zhang, C. S. Bevis, M. N. Jacobs, P. Johnsen, C. Liao, M. Gerrity, H. C. Kapteyn, M. M. Murnane, OSA Imaging and Applied Optics Congress 2021 (3D, COSI, DH, ISA, pcAOP), paper CW6B.1, (2021).

10.1364/cosi.2021.cw6b.1

149

Structure of the trypanosome paraflagellar rod and insights into non-planar motility of eukaryotic cells

J. Zhang, H. Wang, S. Imhof, X. Zhou, S. Liao, I. Atanasov, W. Hui, K. Hill, Z. Hong Zhou, Cell Discovery, 7, (2021).

10.1038/s41421-021-00281-2

150

Asymmetric reconstruction of mammalian reovirus reveals interactions among RNA, transcriptional factor mu 2 and capsid proteins

M. Pan, A. L. Alvarez-Cabrera, J. S. Kang, L. Wang, C. Fan, Z. Hong Zhou, Nature Communications, 12, 4176, (2021).

10.1038/s41467-021-24455-4