Publications

301

Probing thermal and acoustic dynamics of inverse silicon metallatices

C. C. Bevis, B. B. Abad, J. J. Knobloch, T. T. Frazer, A. A. Adak, J. J. Hernández-Charpak, H. H. Cheng, A. A. Grede, N. N. Giebink, N. N. Nova, T. T. Mallouk, P. P. Mahale, W. W. Chen, Y. Y. Xiong, I. I. Dabo, V. V. Crespi, D. D. Talreja, H. H. Kapteyn, V. V. Gopalan, J. J. Badding, M. M. Murnane, Microscopy and Microanalysis, 25, 2174-2175, (2019).

10.1017/s1431927619011607

302

Adjusting the STEM Sample Holder Potential for Improved EBIC Contrast

M. Mecklenburg, W. A. Hubbard, H. Chan, B. C. Regan, Microscopy and Microanalysis, 25, 2354-2355, (2019).

10.1017/s1431927619012509

303

Full-Field Stroboscopic Imaging of Acoustic and Thermal Dynamics in Isolated Nanostructures Using Tabletop EUV Coherent Imaging

B. Wang, R. Karl, G. Mancini, J. Knobloch, T. Frazer, B. Mayor, M. Tanksalvala, C. Bevis, H. Kapteyn, J. N. Hernandez-Charpak, M. Murnane, Microscopy and Microanalysis, 25, 42-43, (2019).

10.1017/s1431927619000941

304

Inducing Electrically-Active Defects in a Gallium Arsenide Nanowire with an Electron Beam

B. T. Zutter, H. Kim, W. A. Hubbard, D. Ren, J. J. Lodico, T. Chang, D. Huffaker, B. C. Regan, Microscopy and Microanalysis, 25, 1618-1619, (2019).

10.1017/s1431927619008821

305

Mapping Electronic State Changes with STEM EBIC

B. C. Regan, T. Joshi, J. J. Lodico, B. T. Zutter, H. Chan, M. Mecklenburg, D. Lederman, W. A. Hubbard, Microscopy and Microanalysis, 25, 1396-1397, (2019).

10.1017/s1431927619007712

306

Mapping Ferroelectricity in Hafnia Thin Films with STEM EBIC

H. Chan, W. A. Hubbard, J. J. Lodico, B. C. Regan, Microscopy and Microanalysis, 25, 1846-1847, (2019).

10.1017/s1431927619009966

307

Ptychographic Complex Imaging Reflectometry for Spatially-Resolved Dopant Profiling Using a Tabletop EUV Source

Y. Esashi, C. L. Porter, M. Tanksalvala, G. P. Miley, N. Horiguchi, J. L. Knobloch, J. Zhou, R. M. Karl, P. Johnsen, C. S. Bevis, B. Wang, S. L. Cousin, M. Gerrity, H. C. Kapteyn, M. M. Murnane, Microscopy and Microanalysis, 25, 116-117, (2019).

10.1017/s1431927619001314

308

Light-Assisted Diazonium Functionalization of Graphene and Spatial Heterogeneities in Reactivity

Y. Li, W. Li, M. Wojcik, B. Wang, L. Lin, M. B. Raschke, K. Xu, The Journal of Physical Chemistry Letters, 10, 4788-4793, (2019).

10.1021/acs.jpclett.9b02225

309

Secondary-Electron Electron-Beam-Induced Current Measurements at Lattice Resolution

M. Mecklenburg, W. A. Hubbard, J. J. Lodico, B. C. Regan, Microscopy and Microanalysis, 25, 1656-1657, (2019).

10.1017/s1431927619009012

310

STEM of a Single Crystal Lithium Ion Battery Anode during Electrochemical Cycling

J. J. Lodico, M. Mecklenburg, H. Chan, W. A. Hubbard, B. C. Regan, Microscopy and Microanalysis, 25, 2060-2061, (2019).

10.1017/s1431927619011036

311

Total Electron Yield Mapping of Electronic Device Features via Measurement of X-Ray Beam-Induced Currents

W. A. Hubbard, J. J. Lodico, B. Zutter, D. Shapiro, Y. Lo, A. Rana, D. Morrill, C. Gentry, H. Chan, B. C. Regan, Microscopy and Microanalysis, 25, 256-257, (2019).

10.1017/s1431927619002010

312

Machine Learning for High Throughput HRTEM Analysis

C. Groschner, C. Choi, D. Nguyen, C. Ophus, M. Scott, Microscopy and Microanalysis, 25, 150-151, (2019).

10.1017/s143192761900148x

313

A new approach for measuring of two-photon absorption using entangled photon pair excitation

A. Mikhaylov, M. D. Mazurek, K. M. Parzuchowski, T. Gerrits, M. J. Stevens, R. Jimenez, Rochester Conference on Coherence and Quantum Optics (CQO-11), (2019).

10.1364/cqo.2019.m5a.1

314

Knife-edge based measurement of the 4D transverse phase space of electron beams with picometer-scale emittance

F. Ji, J. Navarro, P. Musumeci, D. B. Durham, A. M. Minor, D. Filippetto, Physical Review Accelerators and Beams, 15, 082801, (2019).

10.1103/physrevaccelbeams.22.082801

315

Data-driven challenges and opportunities in crystallography

C. Glynn, J. A. Rodriguez, Emerging Topics in Life Sciences, 3, 423-432, (2019).

10.1042/etls20180177

316

Speckle-structured illumination for 3D phase and fluorescence computational microscopy

L. Yeh, S. Chowdhury, N. A. Repina, L. Waller, Biomedical Optics Express, 10, 3635, (2019).

10.1364/boe.10.003635

317

Observing crystal nucleation in four dimensions using atomic electron tomography

J. Zhou, Y. Yang, Y. Yang, D. S. Kim, A. Yuan, X. Tian, C. Ophus, F. Sun, A. K. Schmid, M. Nathanson, H. Heinz, Q. An, H. Zeng, P. Ercius, J. Miao, Nature, 570, 500-503, (2019).

10.1038/s41586-019-1317-x

318

Improved Surface Functionalization and Characterization of Membrane-Targeted Semiconductor Voltage Nanosensors

J. Park, Y. Kuo, J. Li, Y. Huang, E. W. Miller, S. Weiss, The Journal of Physical Chemistry Letters, 10, 3906-3913, (2019).

10.1021/acs.jpclett.9b01258

319

Ultrasensitive Tip- and Antenna-Enhanced Infrared Nanoscopy of Protein Complexes

B. T. O’Callahan, M. Hentschel, M. B. Raschke, P. Z. El-Khoury, A. tt Lea, The Journal of Physical Chemistry C, 123, 17505-17509, (2019).

10.1021/acs.jpcc.9b05777

320

Complex Imaging Reflectometry for Dopant Profile Measurements using Tabletop High Harmonic Light

M. Tanksalvala, C. L. Porter, Y. Esashi, G. P. Miley, N. Horiguchi, R. M. Karl, P. Johnsen, C. S. Bevis, N. W. Jenkins, B. Wang, X. Zhang, S. L. Cousin, D. E. Adams, M. Gerrity, H. C. Kapteyn, M. M. Murnane, Imaging and Applied Optics 2019 (COSI, IS, MATH, pcAOP), (2019).

10.1364/cosi.2019.cw3a.6

321

Advances in in situ nanomechanical testing

A. M. Minor, G. Dehm, MRS Bulletin, 44, 438-442, (2019).

10.1557/mrs.2019.127

322

High Performance Partial Coherent X-Ray Ptychography

P. Enfedaque, H. Chang, B. Enders, D. Shapiro, S. Marchesini, Computational Science – ICCS 2019, 11536, 46 - 59, (2019).

10.1007/978-3-030-22734-0_4

323

Deep learning for single-shot autofocus microscopy

H. Pinkard, Z. Phillips, A. Babakhani, D. A. Fletcher, L. Waller, Optica, 6, 794, (2019).

10.1364/optica.6.000794

324

Direct observation of picosecond melting and disintegration of metallic nanoparticles

Y. Ihm, D. Cho, D. Sung, D. Nam, C. Jung, T. Sato, S. Kim, J. Park, S. Kim, M. Gallagher-Jones, Y. Kim, R. Xu, S. Owada, J. Shim, K. Tono, M. Yabashi, T. Ishikawa, J. Miao, D. Noh, C. Song, Nature Communications, 10, 2411, (2019).

10.1038/s41467-019-10328-4

325

Cryo-EM structures of herpes simplex virus type 1 portal vertex and packaged genome

Y. Liu, J. Jih, X. Dai, G. Bi, Z. ng Zhou, Nature, 570, 257-261, (2019).

10.1038/s41586-019-1248-6

326

Ultrafast Relativistic Electron Nanoprobes

F. F. Ji, D. B. Durham, A. M. Minor, P. P. Musumeci, J. G. Navarro, D. D. Filippetto, Communications Physics, 2, 54, (2019).

10.1038/s42005-019-0154-4

327

In situ structures of rotavirus polymerase in action and mechanism of mRNA transcription and release

K. Ding, C. C. Celma, X. Zhang, T. Chang, W. Shen, I. Atanasov, P. Roy, Z. Hong Zhou, Nature Communications, 10, 2216, (2019).

10.1038/s41467-019-10236-7

328

Elastin-Dependent Aortic Heart Valve Leaflet Curvature Changes During Cyclic Flexure

M. D. Tesfamariam, A. M. Mirza, D. Chaparro, A. Z. Ali, R. Montalvan, I. Saytashev, B. A. Gonzalez, A. Barreto, J. Ramella-Roman, J. D. Hutcheson, S. Ramaswamy, Bioengineering, 6, 39, (2019).

10.3390/bioengineering6020039

329

An Extreme Ultraviolet Spin Grating for Spatially Resolved, Hyperspectral Magnetic Dichroism Spectroscopies

N. J. Brooks, K. M. Dorney, J. L. Ellis, D. D. Hickstein, Q. L. Nguyen, C. Gentry, C. Hernández-García, D. Zusin, J. M. Shaw, G. S. Matthijs Jansen, S. Witte, H. C. Kapteyn, M. M. Murnane, Conference on Lasers and Electro-Optics, (2019).

10.1364/cleo_qels.2019.ff2c.7

330

SQUARREL: Scattering Quotient Analysis to Retrieve the Ratio of Elements in X-ray Ptychography

C. Liao, Y. Lo, J. Zhou, A. Rana, C. S. Bevis, G. Gui, B. Enders, K. Cannon, D. Shapiro, C. Bennett, H. Kapteyn, R. Falcone, J. Miao, M. Murnane, Microscopy and Microanalysis, 25, 112-113, (2019).

10.1017/s1431927619001296

331

Spectral image scanning microscopy

F. Strasser, M. Offterdinger, R. Piestun, A. Jesacher, Biomedical Optics Express, 10, 2513, (2019).

10.1364/boe.10.002513

332

Moments reconstruction and local dynamic range compression of high order superresolution optical fluctuation imaging

X. Yi, S. Son, R. Ando, A. Miyawaki, S. Weiss, Biomedical Optics Express, 10, 2430, (2019).

10.1364/boe.10.002430

333

Information-rich localization microscopy through machine learning

T. Kim, S. Moon, K. Xu, Nature Communications, 10, 1996, (2019).

10.1038/s41467-019-10036-z

334

Investigating the dynamics of ontological reasoning across contexts in quantum physics

J. R. Hoehn, J. D. Gifford, N. D. Finkelstein, Physical Review Physics Education Research, 15, 010124, (2019).

10.1103/physrevphyseducres.15.010124

335

Structure of the human ClC-1 chloride channel

K. Wang, S. Preisler, L. Zhang, Y. Cui, J. Missel, C. Grønberg, K. Gotfryd, E. Lindahl, M. Andersson, K. Calloe, P. F. Egea, D. Klaerke, M. Pusch, P. Pedersen, Z. Hong Zhou, P. Gourdon, PLOS Biology, 17, e3000218, (2019).

10.1371/journal.pbio.3000218

336

A 3.8 Å resolution cryo-EM structure of a small protein bound to an imaging scaffold

Y. Liu, D. T. Huynh, T. O. Yeates, Nature Communications, 10, 1864, (2019).

10.1038/s41467-019-09836-0

337

Fostering sustainable improvements in science education: An analysis through four frames

D. L. Reinholz, C. Ngai, G. Quan, M. E. Pilgrim, J. C. Corbo, N. Finkelstein, Science Education, 103, 1125-1150, (2019).

10.1002/sce.21526

338

Tabletop EUV Coherent Diffractive Imaging and Small Angle Scattering of Colloidal Crystals

M. Giulia F., R. Karl, S. Elisabeth, B. Charles, G. Dennis, T. Michael, R. Jennifer, A. Daniel, K. Henry, B. John, M. Thomas, M. Margaret, EPJ Web of Conferences, 205, 05015, (2019).

10.1051/epjconf/201920505015

339

Ultra-low thermal conductivity and acoustic dynamics of Si nanostructured metalattices probed using ultrafast high harmonic beams

B. Abad, T. Frazer, J. Knobloch, J. Hernández-Charpak, H. Cheng, A. Grede, N. Giebink, T. Mallouk, P. Mahale, W. Chen, Y. Xiong, I. Dabo, V. Crespi, D. Talreja, V. Gopalan, J. Badding, H. Kapteyn, M. Murnane, EPJ Web of Conferences, 205, 04006, (2019).

10.1051/epjconf/201920504006

340

Ultrafast dynamic imaging of thermal and acoustic dynamics in nanosystems using a tabletop high harmonic source

C. Bevis, K. r. Robert, G. F. Mancini, D. Gardner, E. Shanblatt, J. Knobloch, T. Frazer, J. N. Hernandez-Charpak, B. Mayor, M. Tanksalvala, C. Porter, D. Adams, H. Kapteyn, M. M. Murnane, EPJ Web of Conferences, 205, 04005, (2019).

10.1051/epjconf/201920504005

341

Advanced denoising for X-ray ptychography

H. Chang, P. Enfedaque, J. Zhang, J. Reinhardt, B. Enders, Y. Yu, D. Shapiro, C. G. Schroer, T. Zeng, S. Marchesini, Optics Express, 27, 10395, (2019).

10.1364/oe.27.010395

342

Infrared nanospectroscopic imaging in the rotating frame

S. C. Johnson, E. A. Muller, O. Khatib, E. A. Bonnin, A. C. Gagnon, M. B. Raschke, Optica, 6, 424, (2019).

10.1364/optica.6.000424

343

Recent advances in ultrafast X-ray sources

R. Schoenlein, T. Elsaesser, K. Holldack, Z. Huang, H. Kapteyn, M. Murnane, M. Woerner, Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 377, 20180384, (2019).

10.1098/rsta.2018.0384

344

Variable-wavelength tabletop-scale EUV ptychographic complex imaging reflectometry for 3D composition determination

M. Tanksalvala, C. L. Porter, Y. Esashi, G. P. Miley, R. Karl, P. Johnsen, N. W. Jenkins, C. S. Bevis, B. Wang, J. Thurston, X. Zhang, S. L. Cousin, D. E. Adams, M. Gerrity, H. C. Kapteyn, M. M. Murnane, Metrology, Inspection, and Process Control for Microlithography XXXIII, (2019).

10.1117/12.2516827

345

pH-dependent gating mechanism of the Helicobacter pylori urea channel revealed by cryo-EM

Y. Cui, K. Zhou, D. Strugatsky, Y. Wen, G. Sachs, Z. Hong Zhou, K. Munson, Science Advances, 5, eaav8423, (2019).

10.1126/sciadv.aav8423

346

Physics-based Learned Design: Optimized Coded-Illumination for Quantitative Phase Imaging

M. R. Kellman, E. Bostan, N. A. Repina, L. Waller, IEEE Transactions on Computational Imaging, 344-353, (2019).

10.1109/tci.2019.2905434

347

Optical phantoms for biomedical polarimetry: a review

J. Chue-Sang, M. Gonzalez, A. Pierre, M. Laughrey, I. Saytashev, T. Novikova, J. C. Ramella-Roman, Journal of Biomedical Optics, 24, 1, (2019).

10.1117/1.jbo.24.3.030901

348

Homochiral and racemic MicroED structures of a peptide repeat from the ice-nucleation protein InaZ

C. Zee, C. Glynn, M. Gallagher-Jones, J. Miao, C. G. Santiago, D. Cascio, T. Gonen, M. R. Sawaya, J. A. Rodriguez, IUCrJ, 6, 197-205, (2019).

10.1107/s2052252518017621

349

Excitation and Emission Transition Dipoles of Type-II Semiconductor Nanorods

S. Ghosh, A. M. Chizhik, G. Yang, N. Karedla, I. Gregor, D. Oron, S. Weiss, J. Enderlein, A. I. Chizhik, Nano Letters, 19, 1695-1700, (2019).

10.1021/acs.nanolett.8b04695

350

Atomic structures and deletion mutant reveal different capsid-binding patterns and functional significance of tegument protein pp150 in murine and human cytomegaloviruses with implications for therapeutic development

W. Liu, X. Dai, J. Jih, K. Chan, P. Trang, X. Yu, R. Balogun, Y. Mei, F. Liu, Z. Hong Zhou, PLOS Pathogens, 15, e1007615, (2019).

10.1371/journal.ppat.1007615

STROBE Publications

2019