Publications

301

Atomic structures determined from digitally defined nanocrystalline regions

M. Gallagher-Jones, K. C. Bustillo, C. Ophus, L. S. Richards, J. Ciston, S. Lee, A. M. Minor, J. A. Rodriguez, IUCrJ, 7, (2020).

10.1107/s2052252520004030

302

Genome organization and interaction with capsid protein in a multipartite RNA virus

C. Beren, Y. Cui, A. Chakravarty, X. Yang, A. L. N. Rao, C. M. Knobler, Z. Hong Zhou, W. M. Gelbart, Proceedings of the National Academy of Sciences, 117, 10673-10680, (2020).

10.1073/pnas.1915078117

303

In Liquid Infrared Scattering Scanning Near-Field Optical Microscopy for Chemical and Biological Nanoimaging

B. T. O’Callahan, K. Park, I. V. Novikova, T. Jian, C. Chen, E. A. Muller, P. Z. El-Khoury, M. B. Raschke, A. S. Lea, Nano Letters, 20, 4497-4504, (2020).

10.1021/acs.nanolett.0c01291

304

Multi-layer Born multiple-scattering model for 3D phase microscopy

M. Chen, D. Ren, H. Liu, S. Chowdhury, L. Waller, Optica, 7, 394, (2020).

10.1364/optica.383030

305

Spatially Resolved Exciton and Charge Transport in Emerging Semiconductors

N. S. Ginsberg, W. A. Tisdale, Annual Review of Physical Chemistry, 71, (2020).

10.1146/annurev-physchem-052516-050703

306

Action of a minimal contractile bactericidal nanomachine

P. Ge, D. Scholl, N. S. Prokhorov, J. Avaylon, M. M. Shneider, C. Browning, S. A. Buth, M. Plattner, U. Chakraborty, K. Ding, P. G. Leiman, J. F. Miller, Z. Hong Zhou, Nature, 580, 658-662, (2020).

10.1038/s41586-020-2186-z

307

Self validating Mueller matrix Micro–Mesoscope (SAMMM) for the characterization of biological media

I. Saytashev, S. Saha, J. Chue-Sang, P. Lopez, M. Laughrey, J. C. Ramella-Roman, Optics Letters, 45, 2168, (2020).

10.1364/ol.387747

308

Azimuthal multiplexing 3D diffractive optics

H. Wang, R. Piestun, Scientific Reports, 10, 6438 , (2020).

10.1038/s41598-020-63075-8

309

Cryo-EM structure of a human prion fibril with a hydrophobic, protease-resistant core

C. Glynn, M. R. Sawaya, P. Ge, M. Gallagher-Jones, C. W. Short, R. Bowman, M. Apostol, Z. Hong Zhou, D. S. Eisenberg, J. A. Rodriguez, Nature Structural & Molecular Biology, 27, 417-423, (2020).

10.1038/s41594-020-0403-y

310

Development of Lipid-Coated Semiconductor Nanosensors for Recording of Membrane Potential in Neurons

A. Ludwig, P. Serna, L. Morgenstein, G. Yang, O. Bar-Elli, G. Ortiz, E. Miller, D. Oron, A. Grupi, S. Weiss, A. Triller, ACS Photonics, 7, 1141-1152, (2020).

10.1021/acsphotonics.9b01558

311

Heterogeneous Cation–Lattice Interaction and Dynamics in Triple-Cation Perovskites Revealed by Infrared Vibrational Nanoscopy

J. Nishida, A. H. Alfaifi, T. P. Gray, S. E. Shaheen, M. B. Raschke, ACS Energy Letters, 5, 1636-1643, (2020).

10.1021/acsenergylett.0c00522

312

Atomic electron tomography in three and four dimensions

J. Zhou, Y. Yang, P. Ercius, J. Miao, MRS Bulletin, 45, 290-297, (2020).

10.1557/mrs.2020.88

313

Low Dimensional Manifold Model in Hyperspectral Image Reconstruction

W. Zhu, Z. Shi, S. Osher, Hyperspectral Image Analysis, 295-317, (2020).

10.1007/978-3-030-38617-7_10

314

Carrier Diffusion Lengths Exceeding 1 μm Despite Trap-Limited Transport in Halide Double Perovskites

M. Delor, A. H. Slavney, N. R. Wolf, M. R. Filip, J. B. Neaton, H. I. Karunadasa, N. S. Ginsberg, ACS Energy Letters, 5, 1337-1345, (2020).

10.1021/acsenergylett.0c00414

315

Reactive modeling of Mo3Si oxidation and resulting silica morphology

C. C. Dharmawardhana, J. Zhou, M. Taylor, J. Miao, J. H. Perepezko, H. Heinz, Acta Materialia, 187, 93-102, (2020).

10.1016/j.actamat.2020.01.048

316

Development of Multifunctional Biopolymeric Auto-Fluorescent Micro- and Nanogels as a Platform for Biomedical Applications

A. Vashist, V. Atluri, A. Raymond, A. Kaushik, T. Parira, Z. Huang, A. Durygin, A. Tomitaka, R. Nikkhah-Moshaie, A. Vashist, M. Agudelo, H. S. Chand, I. Saytashev, J. C. Ramella-Roman, M. Nair, Frontiers in Bioengineering and Biotechnology, 8, (2020).

10.3389/fbioe.2020.00315

317

Sub-acoustic resolution optical focusing through scattering using photoacoustic fluctuation guided wavefront shaping

M. A. Inzunza-Ibarra, E. Premillieu, C. Grünsteidl, R. Piestun, T. W. Murray, Optics Express, 28, 9823-9832, (2020).

10.1364/oe.385320

318

Nondestructive measurements of the mechanical and structural properties of nanostructured metalattices

B. Abad, J. L. Knobloch, T. D. Frazer, J. N. Hernández-Charpak, H. Y. Cheng, A. J. Grede, N. C. Giebink, T. E. Mallouk, P. Mahale, N. N. Nova, A. A. Tomaschke, V. L. Ferguson, V. H. Crespi, V. Gopalan, H. C. Kapteyn, J. V. Badding, M. M. Murnane, Nano Letters, (2020).

10.1021/acs.nanolett.0c00167

319

Ultrashort electron probe opportunities

P. Musumeci, Nature Photonics, 14, 199-200, (2020).

10.1038/s41566-020-0613-1

320

Resolving Enhanced Mn2+ Luminescence near the Surface of CsPbCl3 with Time-Resolved Cathodoluminescence Imaging

R. B. Wai, N. Ramesh, C. D. Aiello, J. G. Raybin, S. E. Zeltmann, C. G. Bischak, E. Barnard, S. Aloni, D. nk Ogletree, A. M. Minor, N. S. Ginsberg, The Journal of Physical Chemistry Letters, 11, 2624-2629, (2020).

10.1021/acs.jpclett.0c00574

321

Computationally aided, entropy-driven synthesis of highly efficient and durable multi-elemental alloy catalysts

Y. Yao, Z. Liu, P. Xie, Z. Huang, T. Li, D. Morris, Z. Finfrock, J. Zhou, M. Jiao, J. Gao, Y. Mao, J. Miao, P. Zhang, R. Shahbazian-Yassar, C. Wang, G. Wang, L. Hu, Science Advances, 6, eaaz0510, (2020).

10.1126/sciadv.aaz0510

322

On-chip fluorescence microscopy with a random microlens diffuser

G. Kuo, F. Linda Liu, I. Grossrubatscher, R. Ng, L. Waller, Optics Express, 28, 8384-8399, (2020).

10.1364/oe.382055

323

Correlating the three-dimensional atomic defects and electronic properties of two-dimensional transition metal dichalcogenides

X. Tian, D. S. Kim, S. Yang, C. J. Ciccarino, Y. Gong, Y. Yang, Y. Yang, B. Duschatko, Y. Yuan, P. M. Ajayan, J. Idrobo, P. Narang, J. Miao, Nature Materials, (2020).

10.1038/s41563-020-0636-5

324

Vibrational exciton nanoimaging of phases and domains in porphyrin nanocrystals

E. A. Muller, T. P. Gray, Z. Zhou, X. Cheng, O. Khatib, H. A. Bechtel, M. B. Raschke, Proceedings of the National Academy of Sciences, 117, 7030-7037, (2020).

10.1073/pnas.1914172117

325

Posttranslational Modifications Mediate the Structural Diversity of Tauopathy Strains

T. Arakhamia, C. E. Lee, Y. Carlomagno, D. M. Duong, S. R. Kundinger, K. Wang, D. Williams, M. DeTure, D. W. Dickson, C. N. Cook, N. T. Seyfried, L. Petrucelli, A. P. Fitzpatrick, Cell, 180, 633-644.e12, (2020).

10.1016/j.cell.2020.01.027

326

Mapping photocathode quantum efficiency with ghost imaging

K. K. Kabra, S. S. Li, F. F. Cropp, T. J. Lane, P. P. Musumeci, D. D. Ratner, Physical Review Accelerators and Beams, 23, 022803, (2020).

10.1103/physrevaccelbeams.23.022803

327

Atomic structures of anthrax toxin protective antigen channels bound to partially unfolded lethal and edema factors

N. J. Hardenbrook, S. Liu, K. Zhou, K. Ghosal, Z. Hong Zhou, B. A. Krantz, Nature Communications, 11, 840, (2020).

10.1038/s41467-020-14658-6

328

Cutting antiparallel DNA strands in a single active site

X. Chen, Y. Cui, R. B. Best, H. Wang, Z. Hong Zhou, W. Yang, M. Gellert, Nature Structural & Molecular Biology, 27, 119-126, (2020).

10.1038/s41594-019-0363-2

329

How mouse RAG recombinase avoids DNA transposition

X. Chen, Y. Cui, H. Wang, Z. Hong Zhou, M. Gellert, W. Yang, Nature Structural & Molecular Biology, 27, 127-133, (2020).

10.1038/s41594-019-0366-z

330

Patterned probes for high precision 4D-STEM bragg measurements

S. Zeltmann, A. Müller, K. Bustillo, B. Savitzky, L. Hughes, A. Minor, C. Ophus, Ultramicroscopy, 209, 112890, (2020).

10.1016/j.ultramic.2019.112890

331

High-fidelity complex EUV imaging reflectometry for depth-dependent composition determination

Y. Esashi, M. Tanksalvala, C. Porter, N. Jenkins, Z. Zhang, B. Wang, G. P. Miley, J. Knobloch, N. Horiguchi, J. Zhou, E. Hostler, C. Bevis, R. M. Karl, P. Johnsen, M. Jacobs, S. Cousin, C. Liao, J. Miao, M. Gerrity, H. C. Kapteyn, M. M. Murnane, SPIE Advanced Lithography: Metrology, Inspection, and Process Control for Microlithography XXXIV, (2020).

332

Cusp-artifacts in high order superresolution optical fluctuation imaging

X. Yi, S. Weiss, Biomedical Optics Express, 11, 554, (2020).

10.1364/boe.382296

333

Bottom-up structural proteomics: cryoEM of protein complexes enriched from the cellular milieu

C. Ho, X. Li, M. Lai, T. C. Terwilliger, J. R. Beck, J. Wohlschlegel, D. E. Goldberg, A. P. Fitzpatrick, Z. Hong Zhou, Nature Methods, 17, 79-85, (2020).

10.1038/s41592-019-0637-y

334

Selective Lanthanide Sensing with Gold Nanoparticles and Hydroxypyridinone Chelators

R. M. Pallares, K. P. Carter, S. E. Zeltmann, T. Tratnjek, A. M. Minor, R. J. Abergel, Inorganic Chemistry, 59, 2030-2036, (2020).

10.1021/acs.inorgchem.9b03393

335

Methodological development of a new coding scheme for an established assessment on measurement uncertainty in laboratory courses

B. Pollard, R. Hobbs, D. R. Dounas-Frazer, H. J. Lewandowski, 2019 Physics Education Research Conference Proceedings, (2020).

10.1119/perc.2019.pr.pollard

336

Azidated Graphene: Direct Azidation from Monolayers, Click Chemistry, and Bulk Production from Graphite

W. Li, Y. Li, K. Xu, Nano Letters, 20, 534-539, (2020).

10.1021/acs.nanolett.9b04267

337

A multiple scattering algorithm for three dimensional phase contrast atomic electron tomography

D. Ren, C. Ophus, M. Chen, L. Waller, Ultramicroscopy, 208, 112860, (2020).

10.1016/j.ultramic.2019.112860

338

Atomic Structure of the Francisella T6SS Central Spike Reveals a Unique α-Helical Lid and a Putative Cargo

X. Yang, D. L. Clemens, B. Lee, Y. Cui, Z. Hong Zhou, M. A. Horwitz, Structure, 27, 1811-1819.e6, (2019).

10.1016/j.str.2019.10.007

339

Electron beam-induced current imaging with two-angstrom resolution

M. Mecklenburg, W. A. Hubbard, J. J. Lodico, B. C. Regan, Ultramicroscopy, 207, 112852, (2019).

10.1016/j.ultramic.2019.112852

340

Atomic structure of the human herpesvirus 6B capsid and capsid-associated tegument complexes

Y. Zhang, W. Liu, Z. Li, V. Kumar, A. L. Alvarez-Cabrera, E. C. Leibovitch, Y. Cui, Y. Mei, G. Bi, S. Jacobson, Z. Hong Zhou, Nature Communications, 10, 5346 , (2019).

10.1038/s41467-019-13064-x

341

Interfacing the Cell with “Biomimetic Membrane Proteins”

A. Grupi, I. Ashur, N. Degani‐Katzav, S. Yudovich, Z. Shapira, A. Marzouq, L. Morgenstein, Y. Mandel, S. Weiss, Small, 1903006, (2019).

10.1002/smll.201903006

342

Functional Materials Under Stress: In Situ TEM Observations of Structural Evolution

Y. Deng, R. Zhang, T. C. Pekin, C. Gammer, J. Ciston, P. Ercius, C. Ophus, K. Bustillo, C. Song, S. Zhao, H. Guo, Y. Zhao, H. Dong, Z. Chen, A. M. Minor, Advanced Materials, 1906105, (2019).

10.1002/adma.201906105

343

Cryo electron tomography with volta phase plate reveals novel structural foundations of the 96-nm axonemal repeat in the pathogen Trypanosoma brucei

S. Imhof, J. Zhang, H. Wang, K. Bui, H. Nguyen, I. Atanasov, W. H. Hui, S. Yang, Z. Hong Zhou, K. L. Hill, eLife, 8, (2019).

10.7554/elife.52058

344

Semi-implicit relaxed Douglas-Rachford algorithm (sDR) for ptychography

M. Pham, A. Rana, J. Miao, S. Osher, Optics Express, 27, 31246, (2019).

10.1364/oe.27.031246

345

Purcell-Enhanced Spontaneous Emission of Molecular Vibrations

B. Metzger, E. Muller, J. Nishida, B. Pollard, M. Hentschel, M. B. Raschke, Physical Review Letters, 123, 153001, (2019).

10.1103/physrevlett.123.153001

346

Measuring nanoscale thermal gradients in suspended MoS2 with STEM-EELS

L. Shen, M. Mecklenburg, R. Dhall, B. C. Regan, S. B. Cronin, Applied Physics Letters, 115, 153108, (2019).

10.1063/1.5094443

347

Imaging material functionality through three-dimensional nanoscale tracking of energy flow

M. Delor, H. L. Weaver, Q. Yu, N. S. Ginsberg, Nature Materials, 19, 56-62, (2019).

10.1038/s41563-019-0498-x

348

Irreversibility at macromolecular scales in the flake graphite of the lithium-ion battery anode

J. J. Lodico, C. Lai, M. Woodall, H. Chan, E. Garcia, W. A. Hubbard, B. Dunn, B. C. Regan, Journal of Power Sources, 436, 226841, (2019).

10.1016/j.jpowsour.2019.226841

349

Hierarchically-structured large superelastic deformation in ferroelastic-ferroelectrics

Y. Deng, C. Gammer, J. Ciston, P. Ercius, C. Ophus, K. Bustillo, C. Song, R. Zhang, D. Wu, Y. Du, Z. Chen, H. Dong, A. G. Khachaturyan, A. M. Minor, Acta Materialia, 181, 501-509, (2019).

10.1016/j.actamat.2019.10.018

350

Learned reconstructions for practical mask-based lensless imaging

K. Monakhova, J. Yurtsever, G. Kuo, N. Antipa, K. Yanny, L. Waller, Optics Express, 27, 28075, (2019).

10.1364/oe.27.028075

STROBE Publications

2020