Publications

351

Interfacing the Cell with “Biomimetic Membrane Proteins”

A. Grupi, I. Ashur, N. Degani‐Katzav, S. Yudovich, Z. Shapira, A. Marzouq, L. Morgenstein, Y. Mandel, S. Weiss, Small, 1903006, (2019).

10.1002/smll.201903006

352

Functional Materials Under Stress: In Situ TEM Observations of Structural Evolution

Y. Deng, R. Zhang, T. C. Pekin, C. Gammer, J. Ciston, P. Ercius, C. Ophus, K. Bustillo, C. Song, S. Zhao, H. Guo, Y. Zhao, H. Dong, Z. Chen, A. M. Minor, Advanced Materials, 1906105, (2019).

10.1002/adma.201906105

353

Cryo electron tomography with volta phase plate reveals novel structural foundations of the 96-nm axonemal repeat in the pathogen Trypanosoma brucei

S. Imhof, J. Zhang, H. Wang, K. Bui, H. Nguyen, I. Atanasov, W. H. Hui, S. Yang, Z. Hong Zhou, K. L. Hill, eLife, 8, (2019).

10.7554/elife.52058

354

Semi-implicit relaxed Douglas-Rachford algorithm (sDR) for ptychography

M. Pham, A. Rana, J. Miao, S. Osher, Optics Express, 27, 31246, (2019).

10.1364/oe.27.031246

355

Purcell-Enhanced Spontaneous Emission of Molecular Vibrations

B. Metzger, E. Muller, J. Nishida, B. Pollard, M. Hentschel, M. B. Raschke, Physical Review Letters, 123, 153001, (2019).

10.1103/physrevlett.123.153001

356

Measuring nanoscale thermal gradients in suspended MoS2 with STEM-EELS

L. Shen, M. Mecklenburg, R. Dhall, B. C. Regan, S. B. Cronin, Applied Physics Letters, 115, 153108, (2019).

10.1063/1.5094443

357

Imaging material functionality through three-dimensional nanoscale tracking of energy flow

M. Delor, H. L. Weaver, Q. Yu, N. S. Ginsberg, Nature Materials, 19, 56-62, (2019).

10.1038/s41563-019-0498-x

358

Irreversibility at macromolecular scales in the flake graphite of the lithium-ion battery anode

J. J. Lodico, C. Lai, M. Woodall, H. Chan, E. Garcia, W. A. Hubbard, B. Dunn, B. C. Regan, Journal of Power Sources, 436, 226841, (2019).

10.1016/j.jpowsour.2019.226841

359

Hierarchically-structured large superelastic deformation in ferroelastic-ferroelectrics

Y. Deng, C. Gammer, J. Ciston, P. Ercius, C. Ophus, K. Bustillo, C. Song, R. Zhang, D. Wu, Y. Du, Z. Chen, H. Dong, A. G. Khachaturyan, A. M. Minor, Acta Materialia, 181, 501-509, (2019).

10.1016/j.actamat.2019.10.018

360

Learned reconstructions for practical mask-based lensless imaging

K. Monakhova, J. Yurtsever, G. Kuo, N. Antipa, K. Yanny, L. Waller, Optics Express, 27, 28075, (2019).

10.1364/oe.27.028075

361

Design for Hyres cathode nanotip electron source

R. M. Hessami, A. A. Amhaz, P. P. Musumeci, 2019 North American Particle Accelerator Conference, (2019).

362

Characterization of Reactive Organometallic Species via MicroED

C. G. Jones, M. Asay, L. Kim, J. F. Kleinsasser, A. Saha, T. J. Fulton, K. R. Berkley, D. Cascio, A. G. Malyutin, M. P. Conley, B. M. Stoltz, V. Lavallo, J. A. Rodríguez, H. M. Nelson, ACS Central Science, 5, 1507-1513, (2019).

10.1021/acscentsci.9b00403

363

Multimodal x-ray and electron microscopy of the Allende meteorite

Y. Lo, C. Liao, J. Zhou, A. Rana, C. S. Bevis, G. Gui, B. Enders, K. M. Cannon, Y. Yu, R. Celestre, K. Nowrouzi, D. Shapiro, H. Kapteyn, R. Falcone, C. Bennett, M. Murnane, J. Miao, Science Advances, 5, eaax3009, (2019).

10.1126/sciadv.aax3009

364

Characterizing Two-Photon Absorption With g(2)

M. D. Mazurek, A. Mikhaylov, K. Parzuchowski, D. J. Lum, L. K. Shalm, C. Drago, J. E. Sipe, S. Nam, M. T. Cicerone, C. H. Camp, R. Jimenez, T. T. Gerrits, M. J. Stevens, Frontiers in Optics + Laser Science APS/DLS, (2019).

10.1364/fio.2019.jw4a.50

365

DNA-Packing Portal and Capsid-Associated Tegument Complexes in the Tumor Herpesvirus KSHV

D. Gong, X. Dai, J. Jih, Y. Liu, G. Bi, R. Sun, Z. Hong Zhou, Cell, 178, 1329-1343.e12, (2019).

10.1016/j.cell.2019.07.035

366

A unified mechanism for intron and exon definition and back-splicing

X. Li, S. Liu, L. Zhang, A. Issaian, R. C. Hill, S. Espinosa, S. Shi, Y. Cui, K. Kappel, R. Das, K. C. Hansen, Z. Hong Zhou, R. Zhao, Nature, 573, 375-380, (2019).

10.1038/s41586-019-1523-6

367

Design for HyRES Cathode Nanotip Electron Source

R. Hessami, A. Amhaz, P. Musumeci, Proceedings of the North American Particle Accelerator Conference, USA, (2019).

10.18429/JACOW-NAPAC2019-MOPLH04

368

CryoEM structures of Arabidopsis DDR complexes involved in RNA-directed DNA methylation

S. Wongpalee, S. Liu, J. Gallego-Bartolomé, A. Leitner, R. Aebersold, W. Liu, L. Yen, M. A. Nohales, P. Kuo, A. A. Vashisht, J. A. Wohlschlegel, S. Feng, S. A. Kay, Z. Hong Zhou, S. E. Jacobsen, Nature Communications, 10, 3916, (2019).

10.1038/s41467-019-11759-9

369

Progress in Time-Resolved MeV electron microscopy at UCLA

P. P. Denham, N. N. Burger, D. D. Cesar, D. D. Dang, P. P. Musumeci, 2019 North American Particle Accelerator Conference, (2019).

370

Wavefront shaping in complex media with a 350 kHz modulator via a 1D-to-2D transform

O. Tzang, E. Niv, S. Singh, S. Labouesse, G. Myatt, R. Piestun, Nature Photonics, 13, 788-793, (2019).

10.1038/s41566-019-0503-6

371

Oblique-plane single-molecule localization microscopy for tissues and small intact animals

J. Kim, M. Wojcik, Y. Wang, S. Moon, E. A. Zin, N. Marnani, Z. L. Newman, J. G. Flannery, K. Xu, X. Zhang, Nature Methods, 16, 853-857, (2019).

10.1038/s41592-019-0510-z

372

In situ structures of RNA-dependent RNA polymerase inside bluetongue virus before and after uncoating

Y. He, S. Shivakoti, K. Ding, Y. Cui, P. Roy, Z. Hong Zhou, Proceedings of the National Academy of Sciences, 116, 16535-16540, (2019).

10.1073/pnas.1905849116

373

Deconstructing Black physics identity: Linking individual and social constructs using the critical physics identity framework

S. Hyater-Adams, C. Fracchiolla, T. Williams, N. Finkelstein, K. Hinko, Physical Review Physics Education Research, 15, 020115, (2019).

10.1103/physrevphyseducres.15.020115

374

Correlative conventional scanning and ptychographic soft x-ray microscopy

J. Zhao, K. Nowrouzi, R. S. Celestre, M. A. Marcus, Y. Yu, D. A. Shapiro, X-Ray Nanoimaging: Instruments and Methods IV, 11112, (2019).

10.1117/12.2531177

375

Ptychographic Complex Imaging Reflectometry for Spatially-Resolved Dopant Profiling Using a Tabletop EUV Source

Y. Esashi, C. L. Porter, M. Tanksalvala, G. P. Miley, N. Horiguchi, J. L. Knobloch, J. Zhou, R. M. Karl, P. Johnsen, C. S. Bevis, B. Wang, S. L. Cousin, M. Gerrity, H. C. Kapteyn, M. M. Murnane, Microscopy and Microanalysis, 25, 116-117, (2019).

10.1017/s1431927619001314

376

Light-Assisted Diazonium Functionalization of Graphene and Spatial Heterogeneities in Reactivity

Y. Li, W. Li, M. Wojcik, B. Wang, L. Lin, M. B. Raschke, K. Xu, The Journal of Physical Chemistry Letters, 10, 4788-4793, (2019).

10.1021/acs.jpclett.9b02225

377

Secondary-Electron Electron-Beam-Induced Current Measurements at Lattice Resolution

M. Mecklenburg, W. A. Hubbard, J. J. Lodico, B. C. Regan, Microscopy and Microanalysis, 25, 1656-1657, (2019).

10.1017/s1431927619009012

378

STEM of a Single Crystal Lithium Ion Battery Anode during Electrochemical Cycling

J. J. Lodico, M. Mecklenburg, H. Chan, W. A. Hubbard, B. C. Regan, Microscopy and Microanalysis, 25, 2060-2061, (2019).

10.1017/s1431927619011036

379

Total Electron Yield Mapping of Electronic Device Features via Measurement of X-Ray Beam-Induced Currents

W. A. Hubbard, J. J. Lodico, B. Zutter, D. Shapiro, Y. Lo, A. Rana, D. Morrill, C. Gentry, H. Chan, B. C. Regan, Microscopy and Microanalysis, 25, 256-257, (2019).

10.1017/s1431927619002010

380

Machine Learning for High Throughput HRTEM Analysis

C. Groschner, C. Choi, D. Nguyen, C. Ophus, M. Scott, Microscopy and Microanalysis, 25, 150-151, (2019).

10.1017/s143192761900148x

381

Probing thermal and acoustic dynamics of inverse silicon metallatices

C. C. Bevis, B. B. Abad, J. J. Knobloch, T. T. Frazer, A. A. Adak, J. J. Hernández-Charpak, H. H. Cheng, A. A. Grede, N. N. Giebink, N. N. Nova, T. T. Mallouk, P. P. Mahale, W. W. Chen, Y. Y. Xiong, I. I. Dabo, V. V. Crespi, D. D. Talreja, H. H. Kapteyn, V. V. Gopalan, J. J. Badding, M. M. Murnane, Microscopy and Microanalysis, 25, 2174-2175, (2019).

10.1017/s1431927619011607

382

Adjusting the STEM Sample Holder Potential for Improved EBIC Contrast

M. Mecklenburg, W. A. Hubbard, H. Chan, B. C. Regan, Microscopy and Microanalysis, 25, 2354-2355, (2019).

10.1017/s1431927619012509

383

Full-Field Stroboscopic Imaging of Acoustic and Thermal Dynamics in Isolated Nanostructures Using Tabletop EUV Coherent Imaging

B. Wang, R. Karl, G. Mancini, J. Knobloch, T. Frazer, B. Mayor, M. Tanksalvala, C. Bevis, H. Kapteyn, J. N. Hernandez-Charpak, M. Murnane, Microscopy and Microanalysis, 25, 42-43, (2019).

10.1017/s1431927619000941

384

Inducing Electrically-Active Defects in a Gallium Arsenide Nanowire with an Electron Beam

B. T. Zutter, H. Kim, W. A. Hubbard, D. Ren, J. J. Lodico, T. Chang, D. Huffaker, B. C. Regan, Microscopy and Microanalysis, 25, 1618-1619, (2019).

10.1017/s1431927619008821

385

Mapping Electronic State Changes with STEM EBIC

B. C. Regan, T. Joshi, J. J. Lodico, B. T. Zutter, H. Chan, M. Mecklenburg, D. Lederman, W. A. Hubbard, Microscopy and Microanalysis, 25, 1396-1397, (2019).

10.1017/s1431927619007712

386

Mapping Ferroelectricity in Hafnia Thin Films with STEM EBIC

H. Chan, W. A. Hubbard, J. J. Lodico, B. C. Regan, Microscopy and Microanalysis, 25, 1846-1847, (2019).

10.1017/s1431927619009966

387

A new approach for measuring of two-photon absorption using entangled photon pair excitation

A. Mikhaylov, M. D. Mazurek, K. M. Parzuchowski, T. Gerrits, M. J. Stevens, R. Jimenez, Rochester Conference on Coherence and Quantum Optics (CQO-11), (2019).

10.1364/cqo.2019.m5a.1

388

Knife-edge based measurement of the 4D transverse phase space of electron beams with picometer-scale emittance

F. Ji, J. Navarro, P. Musumeci, D. B. Durham, A. M. Minor, D. Filippetto, Physical Review Accelerators and Beams, 15, 082801, (2019).

10.1103/physrevaccelbeams.22.082801

389

Data-driven challenges and opportunities in crystallography

C. Glynn, J. A. Rodriguez, Emerging Topics in Life Sciences, 3, 423-432, (2019).

10.1042/etls20180177

390

Speckle-structured illumination for 3D phase and fluorescence computational microscopy

L. Yeh, S. Chowdhury, N. A. Repina, L. Waller, Biomedical Optics Express, 10, 3635, (2019).

10.1364/boe.10.003635

391

Observing crystal nucleation in four dimensions using atomic electron tomography

J. Zhou, Y. Yang, Y. Yang, D. S. Kim, A. Yuan, X. Tian, C. Ophus, F. Sun, A. K. Schmid, M. Nathanson, H. Heinz, Q. An, H. Zeng, P. Ercius, J. Miao, Nature, 570, 500-503, (2019).

10.1038/s41586-019-1317-x

392

Improved Surface Functionalization and Characterization of Membrane-Targeted Semiconductor Voltage Nanosensors

J. Park, Y. Kuo, J. Li, Y. Huang, E. W. Miller, S. Weiss, The Journal of Physical Chemistry Letters, 10, 3906-3913, (2019).

10.1021/acs.jpclett.9b01258

393

Ultrasensitive Tip- and Antenna-Enhanced Infrared Nanoscopy of Protein Complexes

B. T. O’Callahan, M. Hentschel, M. B. Raschke, P. Z. El-Khoury, A. tt Lea, The Journal of Physical Chemistry C, 123, 17505-17509, (2019).

10.1021/acs.jpcc.9b05777

394

Complex Imaging Reflectometry for Dopant Profile Measurements using Tabletop High Harmonic Light

M. Tanksalvala, C. L. Porter, Y. Esashi, G. P. Miley, N. Horiguchi, R. M. Karl, P. Johnsen, C. S. Bevis, N. W. Jenkins, B. Wang, X. Zhang, S. L. Cousin, D. E. Adams, M. Gerrity, H. C. Kapteyn, M. M. Murnane, Imaging and Applied Optics 2019 (COSI, IS, MATH, pcAOP), (2019).

10.1364/cosi.2019.cw3a.6

395

Advances in in situ nanomechanical testing

A. M. Minor, G. Dehm, MRS Bulletin, 44, 438-442, (2019).

10.1557/mrs.2019.127

396

High Performance Partial Coherent X-Ray Ptychography

P. Enfedaque, H. Chang, B. Enders, D. Shapiro, S. Marchesini, Computational Science – ICCS 2019, 11536, 46 - 59, (2019).

10.1007/978-3-030-22734-0_4

397

Deep learning for single-shot autofocus microscopy

H. Pinkard, Z. Phillips, A. Babakhani, D. A. Fletcher, L. Waller, Optica, 6, 794, (2019).

10.1364/optica.6.000794

398

Direct observation of picosecond melting and disintegration of metallic nanoparticles

Y. Ihm, D. Cho, D. Sung, D. Nam, C. Jung, T. Sato, S. Kim, J. Park, S. Kim, M. Gallagher-Jones, Y. Kim, R. Xu, S. Owada, J. Shim, K. Tono, M. Yabashi, T. Ishikawa, J. Miao, D. Noh, C. Song, Nature Communications, 10, 2411, (2019).

10.1038/s41467-019-10328-4

399

Cryo-EM structures of herpes simplex virus type 1 portal vertex and packaged genome

Y. Liu, J. Jih, X. Dai, G. Bi, Z. ng Zhou, Nature, 570, 257-261, (2019).

10.1038/s41586-019-1248-6

400

Ultrafast Relativistic Electron Nanoprobes

F. F. Ji, D. B. Durham, A. M. Minor, P. P. Musumeci, J. G. Navarro, D. D. Filippetto, Communications Physics, 2, 54, (2019).

10.1038/s42005-019-0154-4

STROBE Publications

2019