Publications

351

High-fidelity complex EUV imaging reflectometry for depth-dependent composition determination

Y. Esashi, M. Tanksalvala, C. Porter, N. Jenkins, Z. Zhang, B. Wang, G. P. Miley, J. Knobloch, N. Horiguchi, J. Zhou, E. Hostler, C. Bevis, R. M. Karl, P. Johnsen, M. Jacobs, S. Cousin, C. Liao, J. Miao, M. Gerrity, H. C. Kapteyn, M. M. Murnane, SPIE Advanced Lithography: Metrology, Inspection, and Process Control for Microlithography XXXIV, (2020).

352

Cusp-artifacts in high order superresolution optical fluctuation imaging

X. Yi, S. Weiss, Biomedical Optics Express, 11, 554, (2020).

10.1364/boe.382296

353

Bottom-up structural proteomics: cryoEM of protein complexes enriched from the cellular milieu

C. Ho, X. Li, M. Lai, T. C. Terwilliger, J. R. Beck, J. Wohlschlegel, D. E. Goldberg, A. P. Fitzpatrick, Z. Hong Zhou, Nature Methods, 17, 79-85, (2020).

10.1038/s41592-019-0637-y

354

Selective Lanthanide Sensing with Gold Nanoparticles and Hydroxypyridinone Chelators

R. M. Pallares, K. P. Carter, S. E. Zeltmann, T. Tratnjek, A. M. Minor, R. J. Abergel, Inorganic Chemistry, 59, 2030-2036, (2020).

10.1021/acs.inorgchem.9b03393

355

Methodological development of a new coding scheme for an established assessment on measurement uncertainty in laboratory courses

B. Pollard, R. Hobbs, D. R. Dounas-Frazer, H. J. Lewandowski, 2019 Physics Education Research Conference Proceedings, (2020).

10.1119/perc.2019.pr.pollard

356

Azidated Graphene: Direct Azidation from Monolayers, Click Chemistry, and Bulk Production from Graphite

W. Li, Y. Li, K. Xu, Nano Letters, 20, 534-539, (2020).

10.1021/acs.nanolett.9b04267

357

A multiple scattering algorithm for three dimensional phase contrast atomic electron tomography

D. Ren, C. Ophus, M. Chen, L. Waller, Ultramicroscopy, 208, 112860, (2020).

10.1016/j.ultramic.2019.112860

358

Atomic Structure of the Francisella T6SS Central Spike Reveals a Unique α-Helical Lid and a Putative Cargo

X. Yang, D. L. Clemens, B. Lee, Y. Cui, Z. Hong Zhou, M. A. Horwitz, Structure, 27, 1811-1819.e6, (2019).

10.1016/j.str.2019.10.007

359

Electron beam-induced current imaging with two-angstrom resolution

M. Mecklenburg, W. A. Hubbard, J. J. Lodico, B. C. Regan, Ultramicroscopy, 207, 112852, (2019).

10.1016/j.ultramic.2019.112852

360

Interfacing the Cell with “Biomimetic Membrane Proteins”

A. Grupi, I. Ashur, N. Degani‐Katzav, S. Yudovich, Z. Shapira, A. Marzouq, L. Morgenstein, Y. Mandel, S. Weiss, Small, 1903006, (2019).

10.1002/smll.201903006

361

Atomic structure of the human herpesvirus 6B capsid and capsid-associated tegument complexes

Y. Zhang, W. Liu, Z. Li, V. Kumar, A. L. Alvarez-Cabrera, E. C. Leibovitch, Y. Cui, Y. Mei, G. Bi, S. Jacobson, Z. Hong Zhou, Nature Communications, 10, 5346 , (2019).

10.1038/s41467-019-13064-x

362

Functional Materials Under Stress: In Situ TEM Observations of Structural Evolution

Y. Deng, R. Zhang, T. C. Pekin, C. Gammer, J. Ciston, P. Ercius, C. Ophus, K. Bustillo, C. Song, S. Zhao, H. Guo, Y. Zhao, H. Dong, Z. Chen, A. M. Minor, Advanced Materials, 1906105, (2019).

10.1002/adma.201906105

363

Cryo electron tomography with volta phase plate reveals novel structural foundations of the 96-nm axonemal repeat in the pathogen Trypanosoma brucei

S. Imhof, J. Zhang, H. Wang, K. Bui, H. Nguyen, I. Atanasov, W. H. Hui, S. Yang, Z. Hong Zhou, K. L. Hill, eLife, 8, (2019).

10.7554/elife.52058

364

Semi-implicit relaxed Douglas-Rachford algorithm (sDR) for ptychography

M. Pham, A. Rana, J. Miao, S. Osher, Optics Express, 27, 31246, (2019).

10.1364/oe.27.031246

365

Purcell-Enhanced Spontaneous Emission of Molecular Vibrations

B. Metzger, E. Muller, J. Nishida, B. Pollard, M. Hentschel, M. B. Raschke, Physical Review Letters, 123, 153001, (2019).

10.1103/physrevlett.123.153001

366

Measuring nanoscale thermal gradients in suspended MoS2 with STEM-EELS

L. Shen, M. Mecklenburg, R. Dhall, B. C. Regan, S. B. Cronin, Applied Physics Letters, 115, 153108, (2019).

10.1063/1.5094443

367

Imaging material functionality through three-dimensional nanoscale tracking of energy flow

M. Delor, H. L. Weaver, Q. Yu, N. S. Ginsberg, Nature Materials, 19, 56-62, (2019).

10.1038/s41563-019-0498-x

368

Irreversibility at macromolecular scales in the flake graphite of the lithium-ion battery anode

J. J. Lodico, C. Lai, M. Woodall, H. Chan, E. Garcia, W. A. Hubbard, B. Dunn, B. C. Regan, Journal of Power Sources, 436, 226841, (2019).

10.1016/j.jpowsour.2019.226841

369

Hierarchically-structured large superelastic deformation in ferroelastic-ferroelectrics

Y. Deng, C. Gammer, J. Ciston, P. Ercius, C. Ophus, K. Bustillo, C. Song, R. Zhang, D. Wu, Y. Du, Z. Chen, H. Dong, A. G. Khachaturyan, A. M. Minor, Acta Materialia, 181, 501-509, (2019).

10.1016/j.actamat.2019.10.018

370

Learned reconstructions for practical mask-based lensless imaging

K. Monakhova, J. Yurtsever, G. Kuo, N. Antipa, K. Yanny, L. Waller, Optics Express, 27, 28075, (2019).

10.1364/oe.27.028075

371

Design for Hyres cathode nanotip electron source

R. M. Hessami, A. A. Amhaz, P. P. Musumeci, 2019 North American Particle Accelerator Conference, (2019).

372

Characterization of Reactive Organometallic Species via MicroED

C. G. Jones, M. Asay, L. Kim, J. F. Kleinsasser, A. Saha, T. J. Fulton, K. R. Berkley, D. Cascio, A. G. Malyutin, M. P. Conley, B. M. Stoltz, V. Lavallo, J. A. Rodríguez, H. M. Nelson, ACS Central Science, 5, 1507-1513, (2019).

10.1021/acscentsci.9b00403

373

Multimodal x-ray and electron microscopy of the Allende meteorite

Y. Lo, C. Liao, J. Zhou, A. Rana, C. S. Bevis, G. Gui, B. Enders, K. M. Cannon, Y. Yu, R. Celestre, K. Nowrouzi, D. Shapiro, H. Kapteyn, R. Falcone, C. Bennett, M. Murnane, J. Miao, Science Advances, 5, eaax3009, (2019).

10.1126/sciadv.aax3009

374

Characterizing Two-Photon Absorption With g(2)

M. D. Mazurek, A. Mikhaylov, K. Parzuchowski, D. J. Lum, L. K. Shalm, C. Drago, J. E. Sipe, S. Nam, M. T. Cicerone, C. H. Camp, R. Jimenez, T. T. Gerrits, M. J. Stevens, Frontiers in Optics + Laser Science APS/DLS, (2019).

10.1364/fio.2019.jw4a.50

375

DNA-Packing Portal and Capsid-Associated Tegument Complexes in the Tumor Herpesvirus KSHV

D. Gong, X. Dai, J. Jih, Y. Liu, G. Bi, R. Sun, Z. Hong Zhou, Cell, 178, 1329-1343.e12, (2019).

10.1016/j.cell.2019.07.035

376

A unified mechanism for intron and exon definition and back-splicing

X. Li, S. Liu, L. Zhang, A. Issaian, R. C. Hill, S. Espinosa, S. Shi, Y. Cui, K. Kappel, R. Das, K. C. Hansen, Z. Hong Zhou, R. Zhao, Nature, 573, 375-380, (2019).

10.1038/s41586-019-1523-6

377

Design for HyRES Cathode Nanotip Electron Source

R. Hessami, A. Amhaz, P. Musumeci, Proceedings of the North American Particle Accelerator Conference, USA, (2019).

10.18429/JACOW-NAPAC2019-MOPLH04

378

CryoEM structures of Arabidopsis DDR complexes involved in RNA-directed DNA methylation

S. Wongpalee, S. Liu, J. Gallego-Bartolomé, A. Leitner, R. Aebersold, W. Liu, L. Yen, M. A. Nohales, P. Kuo, A. A. Vashisht, J. A. Wohlschlegel, S. Feng, S. A. Kay, Z. Hong Zhou, S. E. Jacobsen, Nature Communications, 10, 3916, (2019).

10.1038/s41467-019-11759-9

379

Progress in Time-Resolved MeV electron microscopy at UCLA

P. P. Denham, N. N. Burger, D. D. Cesar, D. D. Dang, P. P. Musumeci, 2019 North American Particle Accelerator Conference, (2019).

380

Wavefront shaping in complex media with a 350 kHz modulator via a 1D-to-2D transform

O. Tzang, E. Niv, S. Singh, S. Labouesse, G. Myatt, R. Piestun, Nature Photonics, 13, 788-793, (2019).

10.1038/s41566-019-0503-6

381

Oblique-plane single-molecule localization microscopy for tissues and small intact animals

J. Kim, M. Wojcik, Y. Wang, S. Moon, E. A. Zin, N. Marnani, Z. L. Newman, J. G. Flannery, K. Xu, X. Zhang, Nature Methods, 16, 853-857, (2019).

10.1038/s41592-019-0510-z

382

Deconstructing Black physics identity: Linking individual and social constructs using the critical physics identity framework

S. Hyater-Adams, C. Fracchiolla, T. Williams, N. Finkelstein, K. Hinko, Physical Review Physics Education Research, 15, 020115, (2019).

10.1103/physrevphyseducres.15.020115

383

Correlative conventional scanning and ptychographic soft x-ray microscopy

J. Zhao, K. Nowrouzi, R. S. Celestre, M. A. Marcus, Y. Yu, D. A. Shapiro, X-Ray Nanoimaging: Instruments and Methods IV, 11112, (2019).

10.1117/12.2531177

384

In situ structures of RNA-dependent RNA polymerase inside bluetongue virus before and after uncoating

Y. He, S. Shivakoti, K. Ding, Y. Cui, P. Roy, Z. Hong Zhou, Proceedings of the National Academy of Sciences, 116, 16535-16540, (2019).

10.1073/pnas.1905849116

385

Full-Field Stroboscopic Imaging of Acoustic and Thermal Dynamics in Isolated Nanostructures Using Tabletop EUV Coherent Imaging

B. Wang, R. Karl, G. Mancini, J. Knobloch, T. Frazer, B. Mayor, M. Tanksalvala, C. Bevis, H. Kapteyn, J. N. Hernandez-Charpak, M. Murnane, Microscopy and Microanalysis, 25, 42-43, (2019).

10.1017/s1431927619000941

386

Inducing Electrically-Active Defects in a Gallium Arsenide Nanowire with an Electron Beam

B. T. Zutter, H. Kim, W. A. Hubbard, D. Ren, J. J. Lodico, T. Chang, D. Huffaker, B. C. Regan, Microscopy and Microanalysis, 25, 1618-1619, (2019).

10.1017/s1431927619008821

387

Mapping Electronic State Changes with STEM EBIC

B. C. Regan, T. Joshi, J. J. Lodico, B. T. Zutter, H. Chan, M. Mecklenburg, D. Lederman, W. A. Hubbard, Microscopy and Microanalysis, 25, 1396-1397, (2019).

10.1017/s1431927619007712

388

Mapping Ferroelectricity in Hafnia Thin Films with STEM EBIC

H. Chan, W. A. Hubbard, J. J. Lodico, B. C. Regan, Microscopy and Microanalysis, 25, 1846-1847, (2019).

10.1017/s1431927619009966

389

Ptychographic Complex Imaging Reflectometry for Spatially-Resolved Dopant Profiling Using a Tabletop EUV Source

Y. Esashi, C. L. Porter, M. Tanksalvala, G. P. Miley, N. Horiguchi, J. L. Knobloch, J. Zhou, R. M. Karl, P. Johnsen, C. S. Bevis, B. Wang, S. L. Cousin, M. Gerrity, H. C. Kapteyn, M. M. Murnane, Microscopy and Microanalysis, 25, 116-117, (2019).

10.1017/s1431927619001314

390

Light-Assisted Diazonium Functionalization of Graphene and Spatial Heterogeneities in Reactivity

Y. Li, W. Li, M. Wojcik, B. Wang, L. Lin, M. B. Raschke, K. Xu, The Journal of Physical Chemistry Letters, 10, 4788-4793, (2019).

10.1021/acs.jpclett.9b02225

391

Secondary-Electron Electron-Beam-Induced Current Measurements at Lattice Resolution

M. Mecklenburg, W. A. Hubbard, J. J. Lodico, B. C. Regan, Microscopy and Microanalysis, 25, 1656-1657, (2019).

10.1017/s1431927619009012

392

STEM of a Single Crystal Lithium Ion Battery Anode during Electrochemical Cycling

J. J. Lodico, M. Mecklenburg, H. Chan, W. A. Hubbard, B. C. Regan, Microscopy and Microanalysis, 25, 2060-2061, (2019).

10.1017/s1431927619011036

393

Total Electron Yield Mapping of Electronic Device Features via Measurement of X-Ray Beam-Induced Currents

W. A. Hubbard, J. J. Lodico, B. Zutter, D. Shapiro, Y. Lo, A. Rana, D. Morrill, C. Gentry, H. Chan, B. C. Regan, Microscopy and Microanalysis, 25, 256-257, (2019).

10.1017/s1431927619002010

394

Machine Learning for High Throughput HRTEM Analysis

C. Groschner, C. Choi, D. Nguyen, C. Ophus, M. Scott, Microscopy and Microanalysis, 25, 150-151, (2019).

10.1017/s143192761900148x

395

Probing thermal and acoustic dynamics of inverse silicon metallatices

C. C. Bevis, B. B. Abad, J. J. Knobloch, T. T. Frazer, A. A. Adak, J. J. Hernández-Charpak, H. H. Cheng, A. A. Grede, N. N. Giebink, N. N. Nova, T. T. Mallouk, P. P. Mahale, W. W. Chen, Y. Y. Xiong, I. I. Dabo, V. V. Crespi, D. D. Talreja, H. H. Kapteyn, V. V. Gopalan, J. J. Badding, M. M. Murnane, Microscopy and Microanalysis, 25, 2174-2175, (2019).

10.1017/s1431927619011607

396

Adjusting the STEM Sample Holder Potential for Improved EBIC Contrast

M. Mecklenburg, W. A. Hubbard, H. Chan, B. C. Regan, Microscopy and Microanalysis, 25, 2354-2355, (2019).

10.1017/s1431927619012509

397

A new approach for measuring of two-photon absorption using entangled photon pair excitation

A. Mikhaylov, M. D. Mazurek, K. M. Parzuchowski, T. Gerrits, M. J. Stevens, R. Jimenez, Rochester Conference on Coherence and Quantum Optics (CQO-11), (2019).

10.1364/cqo.2019.m5a.1

398

Knife-edge based measurement of the 4D transverse phase space of electron beams with picometer-scale emittance

F. Ji, J. Navarro, P. Musumeci, D. B. Durham, A. M. Minor, D. Filippetto, Physical Review Accelerators and Beams, 15, 082801, (2019).

10.1103/physrevaccelbeams.22.082801

399

Data-driven challenges and opportunities in crystallography

C. Glynn, J. A. Rodriguez, Emerging Topics in Life Sciences, 3, 423-432, (2019).

10.1042/etls20180177

400

Speckle-structured illumination for 3D phase and fluorescence computational microscopy

L. Yeh, S. Chowdhury, N. A. Repina, L. Waller, Biomedical Optics Express, 10, 3635, (2019).

10.1364/boe.10.003635

STROBE Publications

2020