Publications

401

Far Infrared Synchrotron Near-Field Nanoimaging and Nanospectroscopy

O. Khatib, H. A. Bechtel, M. C. Martin, M. B. Raschke, G. ce Carr, ACS Photonics, 5, 2773-2779, (2018).

402

In situ coherent diffractive imaging

Y. Lo, L. Zhao, M. Gallagher-Jones, A. Rana, J. J. Lodico, W. Xiao, B. C. Regan, J. Miao, Nature Communications, 9, (2018).

10.1038/s41467-018-04259-9

403

Electron microscope based setup for single-shot 4D trace space reconstruction of bright electron beams

J. Giner Navarro, R. Aßmann, D. Cesar, B. Marchetti, D. Marx, P. Musumeci, Proceedings of the 9th International Particle Accelerator Conference, (2018).

10.18429/JACOW-IPAC2018-THPML106

404

Analysis of Global and Site-Specific Radiation Damage in Cryo-EM

J. Hattne, D. Shi, C. Glynn, C. Zee, M. Gallagher-Jones, M. W. Martynowycz, J. A. Rodriguez, T. Gonen, Structure, 26, 759-766.e4, (2018).

10.1016/j.str.2018.03.021

405

Students’ flexible use of ontologies and the value of tentative reasoning: Examples of conceptual understanding in three canonical topics of quantum mechanics

J. R. Hoehn, N. D. Finkelstein, Physical Review Physics Education Research, 14, 010122, (2018).

10.1103/physrevphyseducres.14.010122

406

Structure of the herpes simplex virus 1 capsid with associated tegument protein complexes

X. Dai, Z. Hong Zhou, Science, 360, eaao7298, (2018).

10.1126/science.aao7298

407

Atomic Structure of the E2 Inner Core of Human Pyruvate Dehydrogenase Complex

J. Jiang, F. L. Baiesc, Y. Hiromasa, X. Yu, W. Hui, X. Dai, T. E. Roche, Z. Hong Zhou, Biochemistry, 57, 2325-2334, (2018).

10.1021/acs.biochem.8b00357

408

Sub-wavelength Resolution, Wide Field-Of-View, and Quantitative 13nm Imaging in Reflection and Transmission with a Tabletop High Harmonic Source

C. Porter, M. Tanksalvala, D. Gardner, G. Mancini, M. Gerrity, G. Miley, X. Zhang, N. Horiguchi, E. Shanblatt, B. Galloway, Y. Esashi, C. Bevis, R. Karl, P. Johnson, D. Adams, H. Kapteyn, M. Murnane, High-Brightness Sources and Light-driven Interactions, (2018).

10.1364/euvxray.2018.et2b.2

409

Characterization and imaging of nanostructured materials using tabletop extreme ultraviolet light sources

R. Karl, G. F. Mancini, J. Knobloch, T. Frazer, J. N. Hernandez-Charpak, B. Abad Mayor, M. Tanksalvala, C. L. Porter, C. S. Bevis, W. Chao, D. E. Adams, H. C. Kapteyn, M. Murnane, Metrology, Inspection, and Process Control for Microlithography XXXII, (2018).

10.1117/12.2297223

410

Complex EUV imaging reflectometry: spatially resolved 3D composition determination and dopant profiling with a tabletop 13nm source

R. Karl, P. Johnsen, D. E. Adams, H. C. Kapteyn, M. M. Murnane, N. Horiguchi, C. L. Porter, M. Tanksalvala, M. Gerrity, G. P. Miley, X. Zhang, C. S. Bevis, Y. Esashi, Metrology, Inspection, and Process Control for Microlithography XXXII, (2018).

10.1117/12.2297464

411

Multi-model imaging of the interaction of nanomaterials with cells

J. Miao, IUCrJ, 5, 122-123, (2018).

10.1107/s2052252518003548

412

Multiphoton microscopy of ECM proteins in baboon aortic leaflet

M. Gonzalez, I. Saytashev, B. Gonzalez, A. Pinero, M. Perez, S. Ramaswamy, J. C. Ramella-Roman, C. Luna, Diagnostic and Therapeutic Applications of Light in Cardiology 2018, (2018).

10.1117/12.2291024

413

Spectrally Resolved and Functional Super-resolution Microscopy via Ultrahigh-Throughput Single-Molecule Spectroscopy

R. Yan, S. Moon, S. J. Kenny, K. Xu, Accounts of Chemical Research, 51, 697-705, (2018).

10.1021/acs.accounts.7b00545

414

Long-Lived Correlated Triplet Pairs in a π-Stacked Crystalline Pentacene Derivative

B. D. Folie, J. B. Haber, S. Refaely-Abramson, J. B. Neaton, N. S. Ginsberg, Journal of the American Chemical Society, 140, 2326-2335, (2018).

10.1021/jacs.7b12662

415

Sub-ångström cryo-EM structure of a prion protofibril reveals a polar clasp

M. Gallagher-Jones, C. Glynn, D. R. Boyer, M. W. Martynowycz, E. Hernandez, J. Miao, C. Zee, I. V. Novikova, L. Goldschmidt, H. T. McFarlane, G. F. Helguera, J. E. Evans, M. R. Sawaya, D. Cascio, D. S. Eisenberg, T. Gonen, J. A. Rodriguez, Nature Structural & Molecular Biology, 25, 131-134, (2018).

10.1038/s41594-017-0018-0

416

Intercalation events visualized in single microcrystals of graphite

E. R. White, J. J. Lodico, B. C. Regan, Nature Communications, 1969, (2017).

10.1038/s41467-017-01787-8

417

Membrane insertion of—and membrane potential sensing by—semiconductor voltage nanosensors: Feasibility demonstration

K. Park, Y. Kuo, V. Shvadchak, A. Ingargiola, X. Dai, L. Hsiung, W. Kim, H. Zhou, P. Zou, A. J. Levine, J. Li, S. Weiss, Science Advances, 4, e1601453, (2018).

10.1126/sciadv.1601453

418

Nanoimaging of Electronic Heterogeneity in Bi2Se3 and Sb2Te3 Nanocrystals

X. Lu, O. Khatib, X. Du, J. Duan, W. Wei, X. Liu, H. A. Bechtel, F. D'Apuzzo, M. Yan, A. Buyanin, Q. Fu, J. Chen, M. Salmeron, J. Zeng, M. B. Raschke, P. Jiang, X. Bao, Advanced Electronic Materials, 4, 1700377, (2017).

10.1002/aelm.201700377

419

Thermometry of Silicon Nanoparticles

M. Mecklenburg, B. Zutter, B. C. Regan, Physical Review Applied, 9, 014005, (2018).

10.1103/physrevapplied.9.014005

420

Structure and mutagenesis reveal essential capsid protein interactions for KSHV replication

X. Dai, D. Gong, H. Lim, J. Jih, T. Wu, R. Sun, Z. Hong Zhou, Nature, 553, 521-525, (2018).

10.1038/nature25438

421

Multiple beam ptychography for large field-of-view, high throughput, quantitative phase contrast imaging

C. Bevis, R. Karl, J. Reichanadter, D. F. Gardner, C. Porter, E. Shanblatt, M. Tanksalvala, G. F. Mancini, H. Kapteyn, M. Murnane, D. Adams, Ultramicroscopy, 184, 164-171, (2018).

10.1016/j.ultramic.2017.08.018

422

Secondary Electron Contrast in STEM Electron Beam-Induced Current (EBIC): a Path Towards Mapping Electronic Structure

W. A. Hubbard, M. Mecklenburg, H. Chan, B. C. Regan, Microscopy and Microanalysis, 24, 1846-1847, (2018).

10.1017/s1431927618009716

423

General-purpose, wide field-of-view reflection imaging with a tabletop 13 nm light source

C. L. Porter, M. Tanksalvala, M. Gerrity, G. Miley, X. Zhang, C. Bevis, E. Shanblatt, R. Karl, M. M. Murnane, D. E. Adams, H. C. Kapteyn, Optica, 4, 1552-1557, (2017).

10.1364/optica.4.001552

424

Structure of the yeast spliceosomal postcatalytic P complex

S. Liu, X. Li, L. Zhang, J. Jiang, R. C. Hill, Y. Cui, K. C. Hansen, Z. Hong Zhou, R. Zhao, Science, 358, 1278-1283, (2017).

10.1126/science.aar3462

425

Catastrophic disassembly of actin filaments via Mical-mediated oxidation

E. E. Grintsevich, P. Ge, M. R. Sawaya, H. Yesilyurt, J. R. Terman, Z. Hong Zhou, E. Reisler, Nature Communications, 8, (2017).

10.1038/s41467-017-02357-8

426

3D image scanning microscopy with engineered excitation and detection

C. Roider, R. Piestun, A. Jesacher, Optica, 4, 1373, (2017).

10.1364/optica.4.001373

427

A streaming multi-GPU implementation of image simulation algorithms for scanning transmission electron microscopy

A. Pryor, C. Ophus, J. Miao, Advanced Structural and Chemical Imaging, 3, 15, (2017).

10.1186/s40679-017-0048-z

428

Low Dimensional Manifold Model for Image Processing

S. Osher, Z. Shi, W. Zhu, SIAM Journal on Imaging Sciences, 10, 1669-1690, (2017).

10.1137/16m1058686

429

Conformation-Directed Formation of Self-Healing Diblock Copolypeptide Hydrogels via Polyion Complexation

Y. Sun, A. L. Wollenberg, T. O’Shea, Y. Cui, Z. Hong Zhou, M. V. Sofroniew, T. J. Deming, Journal of the American Chemical Society, 139, 15114-15121, (2017).

10.1021/jacs.7b08190

430

Noninvasive Cathodoluminescence-Activated Nanoimaging of Dynamic Processes in Liquids

C. G. Bischak, R. B. Wai, C. Cherqui, J. A. Busche, S. C. Quillin, C. L. Hetherington, Z. Wang, C. D. Aiello, D. G. Schlom, S. Aloni, D. nk Ogletree, D. J. Masiello, N. S. Ginsberg, ACS Nano, 11, 10583-10590, (2017).

10.1021/acsnano.7b06081

431

Resolving ultrafast exciton migration in organic solids at the nanoscale

S. B. Penwell, L. S. Ginsberg, R. Noriega, N. S. Ginsberg, Nature Materials, 16, 1136-1141, (2017).

10.1038/nmat4975

432

First Demonstration of Sub-Wavelength Imaging at Short Wavelengths

D. F. Gardner, E. R. Shanblatt, M. Tanksalvala, X. Zhang, B. R. Galloway, C. L. Porter, R. Karl, C. Bevis, B. Zhang, M. D. Seaberg, G. F. Mancini, D. E. Adams, H. C. Kapteyn, M. M. Murnane, Frontiers in Optics 2017, (2017).

10.1364/ls.2017.lm3f.4

433

Plasmon Energy Mapping in Aluminum and Indium with Sub-Nanometer Resolution

B. Zutter, M. Mecklenburg, B. C. Regan, Microscopy and Microanalysis, 2372, 378-379, (2017).

10.1017/s1431927617002574

434

Temperature-dependent signals in STEM Electron Beam-Induced Current (EBIC) Imaging

W. A. Hubbard, E. R. White, M. Mecklenburg, B. C. Regan, Microscopy and Microanalysis, 23, 1506-1507, (2017).

10.1017/s1431927617008194

435

Detailed In Situ Observations of Electromigration in Aluminum Wires

M. Mecklenburg, B. Zutter, W. A. Hubbard, S. Aloni, B. C. Regan, Microscopy and Microanalysis, 23, 1450-1451, (2017).

10.1017/s1431927617007917

436

In Situ Optical Microscopy of the Electrochemical Intercalation of Lithium into Single Crystal Graphite

J. J. Lodico, M. Woodall, H. Chan, W. A. Hubbard, B. C. Regan, Microscopy and Microanalysis, 23, 1982-1983, (2017).

10.1017/s1431927617010571

437

3D Imaging of Nanoalloy Catalysts at Atomic Resolution

J. Zhou, Y. Yang, Z. Zhao, C. Ophus, P. Ercius, Y. Huang, J. Miao, Microscopy and Microanalysis, 23, 2032-2033, (2017).

10.1017/s1431927617010820

438

STEM EBIC Mapping of the Metal-Insulator Transition in Thin-film NbO2

W. A. Hubbard, T. Joshi, M. Mecklenburg, B. Zutter, P. Borisov, D. Lederman, B. C. Regan, Microscopy and Microanalysis, 23, 1428-1429, (2017).

10.1017/s1431927617007802

439

In Situ Observation of Cooling in a Bismuth Telluride and Bismuth-Antimony Telluride Nanoscale Heterojunction

G. Bal, M. Mecklenburg, W. A. Hubbard, B. Vareskic, B. Zutter, S. Aloni, B. C. Regan, Microscopy and Microanalysis, 23, 1996-1997, (2017).

10.1017/s1431927617010649

440

Atomic structure of the human cytomegalovirus capsid with its securing tegument layer of pp150

X. Yu, J. Jih, J. Jiang, Z. Hong Zhou, Science, 356, eaam6892, (2017).

10.1126/science.aam6892

441

Extremely Wide Field of View Tabletop Ptychographic Imaging with 12.7 nm Illumination

C. L. Porter, M. Tanksalvala, M. Gerrity, G. P. Miley, X. Zhang, C. S. Bevis, E. R. Shanblatt, R. Karl, G. F. Mancini, D. A. Adams, H. C. Kapteyn, M. M. Murnane, Imaging and Applied Optics 2017 (3D, AIO, COSI, IS, MATH, pcAOP), (2017).

10.1364/cosi.2017.cw2b.4

442

Stroboscopic Imaging of Acoustic Waves in Nanostructures using Tabletop High Harmonics

R. Karl, G. Mancini, D. Gardner, J. Knobloch, T. Frazer, J. N. Hernandez-Charpak, B. Mayor, E. Shanblatt, M. Tanksalvala, C. Porter, C. Bevis, D. Adams, H. Kapteyn, M. M. Murnane, Imaging and Applied Optics 2017 (3D, AIO, COSI, IS, MATH, pcAOP), (2017).

10.1364/cosi.2017.cw1b.2

443

Sub-wavelength 12.6nm Resolution Using a Tabletop High Harmonic Coherent Diffractive Microscope

C. Bevis, D. F. Gardner, M. Tanksalvala, E. R. Shanblatt, X. Zhang, B. R. Galloway, C. R. Porter, R. Karl, G. F. Mancini, D. E. Adams, H. Kapteyn, M. M. Murnane, Imaging and Applied Optics 2017 (3D, AIO, COSI, IS, MATH, pcAOP), (2017).

10.1364/cosi.2017.cw2b.3

444

Reliable computational design of biological-inorganic materials to the large nanometer scale using Interface-FF

C. C. Dharmawardhana, K. Kanhaiya, T. Lin, A. Garley, M. R. Knecht, J. Zhou, J. Miao, H. Heinz, Molecular Simulation, 43, 1394-1405, (2017).

10.1080/08927022.2017.1332414

445

Correlative cellular ptychography with functionalized nanoparticles at the Fe L-edge

M. Gallagher-Jones, C. Dias, A. Pryor, K. Bouchmella, L. Zhao, Y. Lo, M. Cardoso, D. Shapiro, J. Rodriguez, J. Miao, Scientific Reports, 4757, (2017).

10.1038/s41598-017-04784-5

446

Imaging the spatial modulation of a relativistic electron beam

C. Zhang, D. Cesar, W. Graves, C. Limborg, L. Malin, J. Maxson, P. Musumeci, E. Nanni, J. Spence, A. Urbanowicz, Proceedings of the 8th Int. Particle Accelerator Conf., Denmark, (2017).

10.18429/JACOW-IPAC2017-MOPAB150

447

Enhanced information content for three-dimensional localization and tracking using the double-helix point spread function with variable-angle illumination epifluorescence microscopy

D. Wang, A. Agrawal, R. Piestun, D. K. Schwartz, Applied Physics Letters, 110, 211107, (2017).

10.1063/1.4984133

448

Full-Field Functional Imaging of Nanoscale Dynamics Using Tabletop High Harmonics

R. M. Karl, G. F. Mancini, D. Gardner, E. Shanblatt, J. Knobloch, T. Frazer, J. Hernandez-Charpak, B. Abad Mayor, M. Tanksalvala, C. Porter, C. Bevis, D. Adams, H. Kapteyn, M. Murnane, Conference on Lasers and Electro-Optics, (2017).

10.1364/cleo_at.2017.jth5c.8

449

GENFIRE: A generalized Fourier iterative reconstruction algorithm for high-resolution 3D imaging

A. Pryor, Y. Yang, A. Rana, M. Gallagher-Jones, J. Zhou, Y. Lo, G. Melinte, W. Chiu, J. A. Rodriguez, J. Miao, Scientific Reports, 7, 10409 , (2017).

10.1038/s41598-017-09847-1

450

Sub-wavelength coherent imaging of periodic samples using a 13.5 nm tabletop high harmonic light source

D. F. Gardner, M. Tanksalvala, E. R. Shanblatt, X. Zhang, B. R. Galloway, C. L. Porter, R. Karl Jr, C. Bevis, D. E. Adams, H. C. Kapteyn, M. M. Murnane, G. F. Mancini, Nature Photonics, 11, 259-263, (2017).

10.1038/nphoton.2017.33

STROBE Publications

2018