STROBE Publications

Showing publications 201 – 250 of 441

2021

201

Antibody-Based Inhibition of Pathogenic New World Hemorrhagic Fever Mammarenaviruses by Steric Occlusion of the Human Transferrin Receptor 1 Apical Domain

S. Ferrero, M. D. Flores, C. Short, C. A. Vazquez, L. E. Clark, J. Ziegenbein, S. Zink, D. Fuentes, C. Payes, M. V. Batto, M. Collazo, C. C. García, J. Abraham, S. M. Cordo, J. A. Rodriguez, G. Helguera, Journal of Virology, 95, e01868-20, (2021).

10.1128/jvi.01868-20

202

Native structure of the RhopH complex, a key determinant of malaria parasite nutrient acquisition

C. Ho, J. Jih, M. Lai, X. Li, D. E. Goldberg, J. Beck, Z. Hong Zhou, Proceedings of the National Academy of Sciences, 118, e2100514118, (2021).

10.1073/pnas.2100514118

203

Identification and architecture of a putative secretion tube across mycobacterial outer envelope

X. Cai, L. Liu, C. Qiu, C. Wen, Y. He, Y. Cui, S. Li, X. Zhang, L. Zhang, C. Tian, L. Bi, Z. Zhou, W. Gong, Science Advances, 7, eabg5656, (2021).

10.1126/sciadv.abg5656

204

Introduction of a 3 × 4 Mueller matrix decomposition method

M. Gonzalez, R. Ossikovski, T. Novikova, J. Ramella-Roman, Journal of Physics D: Applied Physics, 54, 424005, (2021).

10.1088/1361-6463/ac1622

205

Mueller matrix imaging for collagen scoring in mice model of pregnancy

H. Lee, I. Saytashev, V. Du Le, M. Mahendroo, J. Ramella-Roman, T. Novikova, Scientific Reports, 11, 15621, (2021).

10.1038/s41598-021-95020-8

206

Crystallization by Amorphous Particle Attachment: On the Evolution of Texture

V. Schoeppler, D. Stier, R. J. Best, C. Song, J. Turner, B. H. Savitzky, C. Ophus, M. A. Marcus, S. Zhao, K. Bustillo, I. Zlotnikov, Advanced Materials, 2101358, (2021).

10.1002/adma.202101358

207

A General and Predictive Understanding of Thermal Transport from 1D- and 2D-Confined Nanostructures: Theory and Experiment

A. Beardo, J. L. Knobloch, L. Sendra, J. Bafaluy, T. D. Frazer, W. Chao, J. N. Hernandez-Charpak, H. C. Kapteyn, B. Abad, M. M. Murnane, F. er Alvarez, J. Camacho, ACS Nano, 15, 13019-13030, (2021).

10.1021/acsnano.1c01946

208

Multidimensional Nano-Imaging of Structure, Coupling, and Disorder in Molecular Materials

S. A. Dönges, R. Peyton Cline, S. E. Zeltmann, J. Nishida, B. Metzger, A. M. Minor, J. Eaves, M. B. Raschke, Nano Letters, 21, 6463-6470, (2021).

10.1021/acs.nanolett.1c01369

209

Structure of the trypanosome paraflagellar rod and insights into non-planar motility of eukaryotic cells

J. Zhang, H. Wang, S. Imhof, X. Zhou, S. Liao, I. Atanasov, W. Hui, K. Hill, Z. Hong Zhou, Cell Discovery, 7, (2021).

10.1038/s41421-021-00281-2

210

Asymmetric reconstruction of mammalian reovirus reveals interactions among RNA, transcriptional factor mu 2 and capsid proteins

M. Pan, A. L. Alvarez-Cabrera, J. S. Kang, L. Wang, C. Fan, Z. Hong Zhou, Nature Communications, 12, 4176, (2021).

10.1038/s41467-021-24455-4

211

Ultrafast optical melting of trimer superstructure in layered 1T′-TaTe2

K. M. Siddiqui, D. B. Durham, F. Cropp, C. Ophus, S. Rajpurohit, Y. Zhu, J. D. Carlström, C. Stavrakas, Z. Mao, A. Raja, P. Musumeci, L. Z. Tan, A. M. Minor, D. Filippetto, R. A. Kaindl, Communications Physics, 4, (2021).

10.1038/s42005-021-00650-z

212

2D Vibrational Exciton Nanoimaging of Domain Formation in Self-Assembled Monolayers

T. P. Gray, J. Nishida, S. C. Johnson, M. B. Raschke, Nano Letters, 21, 5754-5759, (2021).

10.1021/acs.nanolett.1c01515

213

Untrained networks for compressive lensless photography

K. Monakhova, V. Tran, G. Kuo, L. Waller, Optics Express, 29, 20913-20929, (2021).

10.1364/oe.424075

214

Persistent and partially mobile oxygen vacancies in Li-rich layered oxides

P. M. Csernica, S. S. Kalirai, W. E. Gent, K. Lim, Y. Yu, Y. Liu, S. Ahn, E. Kaeli, X. Xu, K. H. Stone, A. F. Marshall, R. Sinclair, D. A. Shapiro, M. F. Toney, W. C. Chueh, Nature Energy, (2021).

10.1038/s41560-021-00832-7

215

Phase-contrast imaging of multiply-scattering extended objects at atomic resolution by reconstruction of the scattering matrix

P. M. Pelz, H. G. Brown, S. Stonemeyer, S. D. Findlay, A. Zettl, P. Ercius, Y. Zhang, J. Ciston, M. C. Scott, C. Ophus, Physical Review Research, 3, 023159, (2021).

10.1103/physrevresearch.3.023159

216

Applying a mathematical sense-making framework to student work and its potential for curriculum design

J. D. Gifford, N. D. Finkelstein, Physical Review Physics Education Research, 17, 010138 , (2021).

10.1103/physrevphyseducres.17.010138

217

Influence of surface and interface roughness on X-ray and extreme ultraviolet reflectance: A comparative numerical study

Y. Esashi, M. Tanksalvala, Z. Zhang, N. W. Jenkins, H. C. Kapteyn, M. M. Murnane, OSA Continuum, 4, 1497-1518, (2021).

10.1364/osac.422924

218

Correlative nano-spectroscopic imaging of heterogeneity in migrated petroleum in unconventional reservoir pores

R. E. Simon, S. C. Johnson, O. Khatib, M. B. Raschke, D. A. Budd, Fuel, 100, 120836, (2021).

10.1016/j.fuel.2021.120836

219

4D-STEM of Beam-Sensitive Materials

K. C. Bustillo, S. E. Zeltmann, M. Chen, J. Donohue, J. Ciston, C. Ophus, A. M. Minor, Accounts of Chemical Research, (2021).

10.1021/acs.accounts.1c00073

220

Structures of telomerase at several steps of telomere repeat synthesis

Y. He, Y. Wang, B. Liu, C. Helmling, L. Sušac, R. Cheng, Z. Hong Zhou, J. Feigon, Nature, 593, 454-459, (2021).

10.1038/s41586-021-03529-9

221

Extreme mixing in nanoscale transition metal alloys

Y. Yao, Z. Huang, L. A. Hughes, J. Gao, T. Li, D. Morris, S. Zeltmann, B. H. Savitzky, C. Ophus, Y. Zou Finfrock, Q. Dong, M. Jiao, Y. Mao, M. Chi, P. Zhang, J. Li, A. Minor, R. Shahbazian-Yassar, L. Hu, Matter, 4, 2340-2353, (2021).

10.1016/j.matt.2021.04.014

222

Tunable mode control through myriad-mode fibers

S. Singh, S. Labouesse, R. Piestun, Journal of Lightwave Technology, 39, 2961-2970, (2021).

10.1109/jlt.2021.3057615

223

Setting Bounds on Entangled Two-Photon Absorption Cross Sections in Common Fluorophores

K. M. Parzuchowski, A. Mikhaylov, M. D. Mazurek, R. N. Wilson, D. J. Lum, T. Gerrits, C. H. Camp, M. J. Stevens, R. Jimenez, Physical Review Applied, 15, 044012 , (2021).

10.1103/physrevapplied.15.044012

224

Auto-detection of cervical collagen and elastin in Mueller matrix polarimetry microscopic images using K-NN and semantic segmentation classification

C. Roa, V. N. Du Le, M. Mahendroo, I. Saytashev, J. C. Ramella-Roman, Biomedical Optics Express, 12, 2236, (2021).

10.1364/boe.420079

225

Differential electron yield imaging with STXM

W. A. Hubbard, J. J. Lodico, X. Ling, B. T. Zutter, Y. Yu, D. A. Shapiro, B. C. Regan, Ultramicroscopy, 222, 113198, (2021).

10.1016/j.ultramic.2020.113198

226

Atomic Structure of the Trichomonas vaginalis Double-Stranded RNA Virus 2

A. Stevens, K. Muratore, Y. Cui, P. Johnson, Z. Hong Zhou, mBio, 12, (2021).

10.1128/mbio.02924-20

227

Millijoule few-cycle pulses from staged compression for strong and high field science

M. Stanfield, N. F. Beier, S. Hakimi, H. Allison, D. Farinella, A. E. Hussein, T. Tajima, F. Dollar, Optics Express, 29, 9123, (2021).

10.1364/oe.417404

228

Pycro-Manager: open-source software for customized and reproducible microscope control

H. Pinkard, N. Stuurman, I. E. Ivanov, N. M. Anthony, W. Ouyang, B. Li, B. Yang, M. A. Tsuchida, B. Chhun, G. Zhang, R. Mei, M. Anderson, D. P. Shepherd, I. Hunt-Isaak, R. L. Dunn, W. Jahr, S. Kato, L. A. Royer, J. R. Thiagarajah, K. W. Eliceiri, E. Lundberg, S. B. Mehta, L. Waller, Nature Methods, 18, 226-228, (2021).

10.1038/s41592-021-01087-6

229

Determining the three-dimensional atomic structure of an amorphous solid

Y. Yang, J. Zhou, F. Zhu, Y. Yuan, . J. Chang, D. S. Kim, M. Pham, A. Rana, X. Tian, Y. Yao, S. J. Osher, A. K. Schmid, L. Hu, P. Ercius, J. Miao, Nature, 592, 60-64, (2021).

10.1038/s41586-021-03354-0

230

Space-Charge Aberrations in Single-Shot Time-Resolved Transmission Electron Microscopy

P. P. Denham, P. P. Musumeci, Physical Review Applied, 15, 024050 , (2021).

10.1103/physrevapplied.15.024050

231

Probing electronic structure in berkelium and californium via an electron microscopy nanosampling approach

A. Müller, G. P. Deblonde, P. Ercius, S. E. Zeltmann, R. J. Abergel, A. M. Minor, Nature Communications, 12, 948, (2021).

10.1038/s41467-021-21189-1

232

Coherent Fourier scatterometry using orbital angular momentum beams for defect detection

B. Wang, M. Tanksalvala, Z. Zhang, Y. Esashi, N. W. Jenkins, M. M. Murnane, H. C. Kapteyn, C. Liao, Optics Express, 29, 3342-3358, (2021).

10.1364/oe.414584

233

Nondestructive, high-resolution, chemically specific 3D nanostructure characterization using phase-sensitive EUV imaging reflectometry

M. Tanksalvala, C. L. Porter, Y. Esashi, B. Wang, N. W. Jenkins, Z. Zhang, G. P. Miley, J. L. Knobloch, B. McBennett, N. Horiguchi, S. Yazdi, J. Zhou, M. N. Jacobs, C. S. Bevis, R. M. Karl, P. Johnsen, D. Ren, L. Waller, D. E. Adams, S. L. Cousin, C. Liao, J. Miao, M. Gerrity, H. C. Kapteyn, M. M. Murnane, Science Advances, 7, eabd9667, (2021).

10.1126/sciadv.abd9667

234

X-ray linear dichroic ptychography

Y. Lo, J. Zhou, A. Rana, D. Morrill, C. Gentry, B. Enders, Y. Yu, C. Sun, D. A. Shapiro, R. W. Falcone, H. C. Kapteyn, M. M. Murnane, P. A. Gilbert, J. Miao, Proceedings of the National Academy of Sciences, e2019068118, (2021).

10.1073/pnas.2019068118

235

Facile, Electrochemical Chlorination of Graphene from an Aqueous NaCl Solution

W. Li, Y. Li, K. Xu, Nano Letters, 21, 1150-1155, (2021).

10.1021/acs.nanolett.0c04641

236

4D Imaging of ZnO-Coated Nanoporous Al2O3 Aerogels by Chemically Sensitive Ptychographic Tomography: Implications for Designer Catalysts

H. Yuan, H. Yuan, T. Casagrande, D. Shapiro, Y. Yu, B. Enders, J. I. Lee, A. van Buuren, M. M. Biener, S. A. Gammon, T. F. Baumann, A. P. Hitchcock, ACS Applied Nano Materials, 4, 621-632, (2021).

10.1021/acsanm.0c02924

237

Laplacian smoothing stochastic gradient markov chain monte carlo

B. Wang, D. Zou, Q. Gu, S. J. Osher, SIAM Journal on Scientific Computing, 43, A26-A53, (2021).

10.1137/19m1294356

2020

238

Ab Initio Determination of Peptide Structures by MicroED

C. Zee, A. Saha, M. R. Sawaya, J. A. Rodriguez, cryoEM, 2215, 329-348, (2020).

10.1007/978-1-0716-0966-8_17

239

An ultrahigh-resolution soft x-ray microscope for quantitative analysis of chemically heterogeneous nanomaterials

D. A. Shapiro, S. Babin, R. S. Celestre, W. Chao, R. P. Conley, P. Denes, B. Enders, P. Enfedaque, S. James, J. M. Joseph, H. Krishnan, S. Marchesini, K. Muriki, K. Nowrouzi, S. R. Oh, H. Padmore, T. Warwick, L. Yang, V. V. Yashchuk, Y. Yu, J. Zhao, Science Advances, 6, eabc4904, (2020).

10.1126/sciadv.abc4904

240

Impact of a course transformation on students’ reasoning about measurement uncertainty

B. Pollard, A. Werth, R. Hobbs, H. J. Lewandowski, Physical Review Physics Education Research, 16, 020160, (2020).

10.1103/physrevphyseducres.16.020160

241

Refining a model for understanding and characterizing instructor pedagogy in informal physics learning environments

M. B. Bennett, B. Fiedler, N. D. Finkelstein, Physical Review Physics Education Research, 16, 020137, (2020).

10.1103/physrevphyseducres.16.020137

242

Smart Scattering Scanning Near-Field Optical Microscopy

S. Labouesse, S. C. Johnson, H. A. Bechtel, M. B. Raschke, R. Piestun, ACS Photonics, 7, 3346-3352, (2020).

10.1021/acsphotonics.0c00553

243

A review of polarization-based imaging technologies for clinical and preclinical applications

J. Ramella-Roman, I. Saytashev, M. Piccini, Journal of Optics, 22, 123001, (2020).

10.1088/2040-8986/abbf8a

244

Mesophasic organization of GABAA receptors in hippocampal inhibitory synapses

Y. Liu, C. Tao, X. Zhang, W. Xia, D. Shi, L. Qi, C. Xu, R. Sun, X. Li, P. Lau, Z. Hong Zhou, G. Bi, Nature Neuroscience, 1589-1596, (2020).

10.1038/s41593-020-00729-w

245

Ptychographic atomic electron tomography: Towards three-dimensional imaging of individual light atoms in materials

D. J. Chang, D. S. Kim, A. Rana, X. Tian, J. Zhou, P. Ercius, J. Miao, Physical Review B, 102, 174101, (2020).

10.1103/physrevb.102.174101

246

Depth-resolved Mueller matrix polarimetry microscopy of the rat cornea

V. N. Du Le, I. Saytashev, S. Saha, P. F. Lopez, M. Laughrey, J. C. Ramella-Roman, Biomedical Optics Express, 5982, (2020).

10.1364/boe.402201

247

Structures from the Mesophase: MicroED Targets Crystals Extracted from LCP

M. Gallagher-Jones, J. A. Rodriguez, Structure, 28, 1084-1086, (2020).

10.1016/j.str.2020.09.005

248

Spectral DiffuserCam: lensless snapshot hyperspectral imaging with a spectral filter array

K. Monakhova, K. Yanny, N. Aggarwal, L. Waller, Optica, 7, 1298-1307, (2020).

10.1364/optica.397214

249

A Calcium Sensor Discovered in Bluetongue Virus Nonstructural Protein 2 Is Critical for Virus Replication

S. Rahman, A. Kerviel, B. Mohl, Y. He, Z. Hong Zhou, P. Roy, Journal of Virology, (2020).

10.1128/jvi.01099-20

250

Memory-Efficient Learning for Large-Scale Computational Imaging

M. Kellman, K. Zhang, E. Markley, J. Tamir, E. Bostan, M. Lustig, L. Waller, IEEE Transactions on Computational Imaging, 6, 1403-1414, (2020).

10.1109/tci.2020.3025735