STROBE Publications

Showing publications 201 – 250 of 432

2021

201

Asymmetric reconstruction of mammalian reovirus reveals interactions among RNA, transcriptional factor mu 2 and capsid proteins

M. Pan, A. L. Alvarez-Cabrera, J. S. Kang, L. Wang, C. Fan, Z. Hong Zhou, Nature Communications, 12, 4176, (2021).

10.1038/s41467-021-24455-4

202

Ultrafast optical melting of trimer superstructure in layered 1T′-TaTe2

K. M. Siddiqui, D. B. Durham, F. Cropp, C. Ophus, S. Rajpurohit, Y. Zhu, J. D. Carlström, C. Stavrakas, Z. Mao, A. Raja, P. Musumeci, L. Z. Tan, A. M. Minor, D. Filippetto, R. A. Kaindl, Communications Physics, 4, (2021).

10.1038/s42005-021-00650-z

203

2D Vibrational Exciton Nanoimaging of Domain Formation in Self-Assembled Monolayers

T. P. Gray, J. Nishida, S. C. Johnson, M. B. Raschke, Nano Letters, 21, 5754-5759, (2021).

10.1021/acs.nanolett.1c01515

204

Untrained networks for compressive lensless photography

K. Monakhova, V. Tran, G. Kuo, L. Waller, Optics Express, 29, 20913-20929, (2021).

10.1364/oe.424075

205

Persistent and partially mobile oxygen vacancies in Li-rich layered oxides

P. M. Csernica, S. S. Kalirai, W. E. Gent, K. Lim, Y. Yu, Y. Liu, S. Ahn, E. Kaeli, X. Xu, K. H. Stone, A. F. Marshall, R. Sinclair, D. A. Shapiro, M. F. Toney, W. C. Chueh, Nature Energy, (2021).

10.1038/s41560-021-00832-7

206

Phase-contrast imaging of multiply-scattering extended objects at atomic resolution by reconstruction of the scattering matrix

P. M. Pelz, H. G. Brown, S. Stonemeyer, S. D. Findlay, A. Zettl, P. Ercius, Y. Zhang, J. Ciston, M. C. Scott, C. Ophus, Physical Review Research, 3, 023159, (2021).

10.1103/physrevresearch.3.023159

207

Applying a mathematical sense-making framework to student work and its potential for curriculum design

J. D. Gifford, N. D. Finkelstein, Physical Review Physics Education Research, 17, 010138 , (2021).

10.1103/physrevphyseducres.17.010138

208

Influence of surface and interface roughness on X-ray and extreme ultraviolet reflectance: A comparative numerical study

Y. Esashi, M. Tanksalvala, Z. Zhang, N. W. Jenkins, H. C. Kapteyn, M. M. Murnane, OSA Continuum, 4, 1497-1518, (2021).

10.1364/osac.422924

209

Correlative nano-spectroscopic imaging of heterogeneity in migrated petroleum in unconventional reservoir pores

R. E. Simon, S. C. Johnson, O. Khatib, M. B. Raschke, D. A. Budd, Fuel, 100, 120836, (2021).

10.1016/j.fuel.2021.120836

210

4D-STEM of Beam-Sensitive Materials

K. C. Bustillo, S. E. Zeltmann, M. Chen, J. Donohue, J. Ciston, C. Ophus, A. M. Minor, Accounts of Chemical Research, (2021).

10.1021/acs.accounts.1c00073

211

Structures of telomerase at several steps of telomere repeat synthesis

Y. He, Y. Wang, B. Liu, C. Helmling, L. Sušac, R. Cheng, Z. Hong Zhou, J. Feigon, Nature, 593, 454-459, (2021).

10.1038/s41586-021-03529-9

212

Extreme mixing in nanoscale transition metal alloys

Y. Yao, Z. Huang, L. A. Hughes, J. Gao, T. Li, D. Morris, S. Zeltmann, B. H. Savitzky, C. Ophus, Y. Zou Finfrock, Q. Dong, M. Jiao, Y. Mao, M. Chi, P. Zhang, J. Li, A. Minor, R. Shahbazian-Yassar, L. Hu, Matter, 4, 2340-2353, (2021).

10.1016/j.matt.2021.04.014

213

Tunable mode control through myriad-mode fibers

S. Singh, S. Labouesse, R. Piestun, Journal of Lightwave Technology, 39, 2961-2970, (2021).

10.1109/jlt.2021.3057615

214

Setting Bounds on Entangled Two-Photon Absorption Cross Sections in Common Fluorophores

K. M. Parzuchowski, A. Mikhaylov, M. D. Mazurek, R. N. Wilson, D. J. Lum, T. Gerrits, C. H. Camp, M. J. Stevens, R. Jimenez, Physical Review Applied, 15, 044012 , (2021).

10.1103/physrevapplied.15.044012

215

Auto-detection of cervical collagen and elastin in Mueller matrix polarimetry microscopic images using K-NN and semantic segmentation classification

C. Roa, V. N. Du Le, M. Mahendroo, I. Saytashev, J. C. Ramella-Roman, Biomedical Optics Express, 12, 2236, (2021).

10.1364/boe.420079

216

Differential electron yield imaging with STXM

W. A. Hubbard, J. J. Lodico, X. Ling, B. T. Zutter, Y. Yu, D. A. Shapiro, B. C. Regan, Ultramicroscopy, 222, 113198, (2021).

10.1016/j.ultramic.2020.113198

217

Atomic Structure of the Trichomonas vaginalis Double-Stranded RNA Virus 2

A. Stevens, K. Muratore, Y. Cui, P. Johnson, Z. Hong Zhou, mBio, 12, (2021).

10.1128/mbio.02924-20

218

Millijoule few-cycle pulses from staged compression for strong and high field science

M. Stanfield, N. F. Beier, S. Hakimi, H. Allison, D. Farinella, A. E. Hussein, T. Tajima, F. Dollar, Optics Express, 29, 9123, (2021).

10.1364/oe.417404

219

Pycro-Manager: open-source software for customized and reproducible microscope control

H. Pinkard, N. Stuurman, I. E. Ivanov, N. M. Anthony, W. Ouyang, B. Li, B. Yang, M. A. Tsuchida, B. Chhun, G. Zhang, R. Mei, M. Anderson, D. P. Shepherd, I. Hunt-Isaak, R. L. Dunn, W. Jahr, S. Kato, L. A. Royer, J. R. Thiagarajah, K. W. Eliceiri, E. Lundberg, S. B. Mehta, L. Waller, Nature Methods, 18, 226-228, (2021).

10.1038/s41592-021-01087-6

220

Determining the three-dimensional atomic structure of an amorphous solid

Y. Yang, J. Zhou, F. Zhu, Y. Yuan, . J. Chang, D. S. Kim, M. Pham, A. Rana, X. Tian, Y. Yao, S. J. Osher, A. K. Schmid, L. Hu, P. Ercius, J. Miao, Nature, 592, 60-64, (2021).

10.1038/s41586-021-03354-0

221

Space-Charge Aberrations in Single-Shot Time-Resolved Transmission Electron Microscopy

P. P. Denham, P. P. Musumeci, Physical Review Applied, 15, 024050 , (2021).

10.1103/physrevapplied.15.024050

222

Probing electronic structure in berkelium and californium via an electron microscopy nanosampling approach

A. Müller, G. P. Deblonde, P. Ercius, S. E. Zeltmann, R. J. Abergel, A. M. Minor, Nature Communications, 12, 948, (2021).

10.1038/s41467-021-21189-1

223

Coherent Fourier scatterometry using orbital angular momentum beams for defect detection

B. Wang, M. Tanksalvala, Z. Zhang, Y. Esashi, N. W. Jenkins, M. M. Murnane, H. C. Kapteyn, C. Liao, Optics Express, 29, 3342-3358, (2021).

10.1364/oe.414584

224

Nondestructive, high-resolution, chemically specific 3D nanostructure characterization using phase-sensitive EUV imaging reflectometry

M. Tanksalvala, C. L. Porter, Y. Esashi, B. Wang, N. W. Jenkins, Z. Zhang, G. P. Miley, J. L. Knobloch, B. McBennett, N. Horiguchi, S. Yazdi, J. Zhou, M. N. Jacobs, C. S. Bevis, R. M. Karl, P. Johnsen, D. Ren, L. Waller, D. E. Adams, S. L. Cousin, C. Liao, J. Miao, M. Gerrity, H. C. Kapteyn, M. M. Murnane, Science Advances, 7, eabd9667, (2021).

10.1126/sciadv.abd9667

225

X-ray linear dichroic ptychography

Y. Lo, J. Zhou, A. Rana, D. Morrill, C. Gentry, B. Enders, Y. Yu, C. Sun, D. A. Shapiro, R. W. Falcone, H. C. Kapteyn, M. M. Murnane, P. A. Gilbert, J. Miao, Proceedings of the National Academy of Sciences, e2019068118, (2021).

10.1073/pnas.2019068118

226

Facile, Electrochemical Chlorination of Graphene from an Aqueous NaCl Solution

W. Li, Y. Li, K. Xu, Nano Letters, 21, 1150-1155, (2021).

10.1021/acs.nanolett.0c04641

227

4D Imaging of ZnO-Coated Nanoporous Al2O3 Aerogels by Chemically Sensitive Ptychographic Tomography: Implications for Designer Catalysts

H. Yuan, H. Yuan, T. Casagrande, D. Shapiro, Y. Yu, B. Enders, J. I. Lee, A. van Buuren, M. M. Biener, S. A. Gammon, T. F. Baumann, A. P. Hitchcock, ACS Applied Nano Materials, 4, 621-632, (2021).

10.1021/acsanm.0c02924

228

Laplacian smoothing stochastic gradient markov chain monte carlo

B. Wang, D. Zou, Q. Gu, S. J. Osher, SIAM Journal on Scientific Computing, 43, A26-A53, (2021).

10.1137/19m1294356

2020

229

Ab Initio Determination of Peptide Structures by MicroED

C. Zee, A. Saha, M. R. Sawaya, J. A. Rodriguez, cryoEM, 2215, 329-348, (2020).

10.1007/978-1-0716-0966-8_17

230

An ultrahigh-resolution soft x-ray microscope for quantitative analysis of chemically heterogeneous nanomaterials

D. A. Shapiro, S. Babin, R. S. Celestre, W. Chao, R. P. Conley, P. Denes, B. Enders, P. Enfedaque, S. James, J. M. Joseph, H. Krishnan, S. Marchesini, K. Muriki, K. Nowrouzi, S. R. Oh, H. Padmore, T. Warwick, L. Yang, V. V. Yashchuk, Y. Yu, J. Zhao, Science Advances, 6, eabc4904, (2020).

10.1126/sciadv.abc4904

231

Impact of a course transformation on students’ reasoning about measurement uncertainty

B. Pollard, A. Werth, R. Hobbs, H. J. Lewandowski, Physical Review Physics Education Research, 16, 020160, (2020).

10.1103/physrevphyseducres.16.020160

232

Refining a model for understanding and characterizing instructor pedagogy in informal physics learning environments

M. B. Bennett, B. Fiedler, N. D. Finkelstein, Physical Review Physics Education Research, 16, 020137, (2020).

10.1103/physrevphyseducres.16.020137

233

Smart Scattering Scanning Near-Field Optical Microscopy

S. Labouesse, S. C. Johnson, H. A. Bechtel, M. B. Raschke, R. Piestun, ACS Photonics, 7, 3346-3352, (2020).

10.1021/acsphotonics.0c00553

234

A review of polarization-based imaging technologies for clinical and preclinical applications

J. Ramella-Roman, I. Saytashev, M. Piccini, Journal of Optics, 22, 123001, (2020).

10.1088/2040-8986/abbf8a

235

Mesophasic organization of GABAA receptors in hippocampal inhibitory synapses

Y. Liu, C. Tao, X. Zhang, W. Xia, D. Shi, L. Qi, C. Xu, R. Sun, X. Li, P. Lau, Z. Hong Zhou, G. Bi, Nature Neuroscience, 1589-1596, (2020).

10.1038/s41593-020-00729-w

236

Ptychographic atomic electron tomography: Towards three-dimensional imaging of individual light atoms in materials

D. J. Chang, D. S. Kim, A. Rana, X. Tian, J. Zhou, P. Ercius, J. Miao, Physical Review B, 102, 174101, (2020).

10.1103/physrevb.102.174101

237

Depth-resolved Mueller matrix polarimetry microscopy of the rat cornea

V. N. Du Le, I. Saytashev, S. Saha, P. F. Lopez, M. Laughrey, J. C. Ramella-Roman, Biomedical Optics Express, 5982, (2020).

10.1364/boe.402201

238

Structures from the Mesophase: MicroED Targets Crystals Extracted from LCP

M. Gallagher-Jones, J. A. Rodriguez, Structure, 28, 1084-1086, (2020).

10.1016/j.str.2020.09.005

239

Spectral DiffuserCam: lensless snapshot hyperspectral imaging with a spectral filter array

K. Monakhova, K. Yanny, N. Aggarwal, L. Waller, Optica, 7, 1298-1307, (2020).

10.1364/optica.397214

240

A Calcium Sensor Discovered in Bluetongue Virus Nonstructural Protein 2 Is Critical for Virus Replication

S. Rahman, A. Kerviel, B. Mohl, Y. He, Z. Hong Zhou, P. Roy, Journal of Virology, (2020).

10.1128/jvi.01099-20

241

Memory-Efficient Learning for Large-Scale Computational Imaging

M. Kellman, K. Zhang, E. Markley, J. Tamir, E. Bostan, M. Lustig, L. Waller, IEEE Transactions on Computational Imaging, 6, 1403-1414, (2020).

10.1109/tci.2020.3025735

242

Categorical framework for mathematical sense making in physics

J. D. Gifford, N. D. Finkelstein, Physical Review Physics Education Research, 16, 020121, (2020).

10.1103/physrevphyseducres.16.020121

243

An ultra-compact x-ray free-electron laser

J. Rosenzweig, N. Majernik, R. Robles, G. Andonian, O. Camacho, A. Fukasawa, A. Kogar, G. Lawler, J. Miao, P. Musumeci, B. Naranjo, Y. Sakai, R. Candler, B. Pound, C. Pellegrini, C. Emma, A. Halavanau, J. Hastings, Z. Li, M. Nasr, S. Tantawi, P. P. Anisimov, B. Carlsten, F. Krawczyk, E. Simakov, L. Faillace, M. Ferrario, B. Spataro, S. Karkare, J. Maxson, Y. Ma, J. Wurtele, A. Murokh, A. Zholents, A. Cianchi, D. Cocco, S. van der Geer, New Journal of Physics, 093067, (2020).

10.1088/1367-2630/abb16c

244

Charging-driven coarsening and melting of a colloidal nanoparticle monolayer at an ionic liquid-vacuum interface

C. G. Bischak, J. G. Raybin, J. W. Kruppe, N. S. Ginsberg, Soft Matter, 9578-9589, (2020).

10.1039/d0sm01395a

245

Tilted fluctuation electron microscopy

E. Kennedy, N. Reynolds, L. Rangel DaCosta, F. Hellman, C. Ophus, M. C. Scott, Applied Physics Letters, 117, 091903, (2020).

10.1063/5.0015532

246

Process of transforming of an introductory mechanics lab course at Fort Lewis College

A. Werth, H. J. Lewandowski, 2020 Physics Education Research Conference Proceedings, (2020).

10.1119/perc.2020.pr.werth

247

Potential of Attosecond Coherent Diffractive Imaging

A. Rana, J. Zhang, M. Pham, A. Yuan, Y. Lo, H. Jiang, S. J. Osher, J. Miao, Physical Review Letters, 125, 086101, (2020).

10.1103/physrevlett.125.086101

248

Engineering Mesoporous Silica Nanoparticles for Targeted Alpha Therapy against Breast Cancer

R. M. Pallares, P. Agbo, X. Liu, D. D. An, S. S. Gauny, S. E. Zeltmann, A. M. Minor, R. J. Abergel, ACS Applied Materials & Interfaces, 12, 40078-40084, (2020).

10.1021/acsami.0c11051

249

Structural basis for STAT2 suppression by flavivirus NS5

B. Wang, S. Thurmond, K. Zhou, M. T. Sánchez-Aparicio, J. Fang, J. Lu, L. Gao, W. Ren, Y. Cui, E. C. Veit, H. Hong, M. J. Evans, S. E. O’Leary, A. García-Sastre, Z. Hong Zhou, R. Hai, J. Song, Nature Structural & Molecular Biology, (2020).

10.1038/s41594-020-0472-y

250

Attosecond light science and its application for probing quantum materials

X. Shi, C. Liao, Z. Tao, E. Cating-Subramanian, M. Murnane, C. Hernández-García, H. Kapteyn, Journal of Physics B: Atomic, Molecular and Optical Physics, 53, 184008, (2020).

10.1088/1361-6455/aba2fb